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Protein Overview: FBpp0311415, Mf-PC

General Information:
Name(s) found: FBpp0311415 [FlyBase]
Mf-PC / FBpp0082491 [FlyBase]
Description(s) found:
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  • gi|46019967|emb|CAD61346.1| Mf2 protein [Drosophila melanogaster] [NCBI NR]
  • gi|25010049|gb|AAN71190.1| GH23305p [Drosophila melanogaster] [NCBI NR]
  • gi|24646991|ref|NP_731972.1| myofilin, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|23171310|gb|AAN13627.1| myofilin, isoform C [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3R:complement(11001880..11002015,11002086..11002155,11004002..11004211,11004761..11004851); ID=FBpp0311415; name=Mf-PQ; parent=FBgn0038294,FBtr0345220; dbxref=FlyBase:FBpp0311415,FlyBase_Annotation_IDs:CG6803-PQ; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r5.56; species=Dmel; [FlyBase]
  • The gene Myofilin is referred to in FlyBase by the symbol Dmel\Mf (CG6803, FBgn0038294). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:10996347..11006143. It has the cytological map location 88E2. Its molecular function is unknown. It is reported to be involved in the biological process</span>: muscle thick filament assembly. 4 alleles are reported. No phenotypic data is available. It has 10 annotated transcripts and 10 annotated polypeptides. [FlyBase]
  • >CG6803-PC translation from_gene[CG6803 CG6803 FBgn0038294] seq_release:3 mol_weight=19832 cds_boundaries:(3R:11,001,901..11,004,869[-]) aa_length:168 transcript_info:[CG6803-RC seq_release:3] gene_info:[gene symbol:CG6803 FBgn0038294 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8I062) CG6803-PC (GH23305p) [DrosMelano7227.FASTAC.txt]
  • CG6803-PC, isoform C [Drosophila melanogaster]gi|24646991|ref|NP_731972.1| CG6803-PC [Drosophila melanogaster]gi|25010049|gb|AAN71190.1| GH23305p [Drosophila melanogaster]gi|46019967|emb|CAD61346.1| myofilin protein isoform b [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(11001880..11002015,11002086..11002155,11004002..11004211,11004761..11004851); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REF [fly-100309-contam.fasta]
  • GH23305p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Mf2 protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6803-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Zeelin1 CG6803-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(11001880..11002015,11002086..11002155,11004002..11004211,11004761..11004851); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(11001880..11002015,11002086..11002155,11004002..11004211,11004761..11004851); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GH23305p OS=Drosophila melanogaster GN=Mf PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(11001880..11002015,11002086..11002155,11004002..11004211,11004761..11004851); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627,FlyMine:FBpp0082491,modMine:FBpp0082491; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627,FlyMine:FBpp0082491,modMine:FBpp0082491; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0311415; name=Mf-PQ; parent=FBgn0038294,FBtr0345220; dbxref=FlyBase:FBpp0311415,FlyBase_Annotation_IDs:CG6803-PQ,GB_protein:AHN57334,REFSEQ:NP_001287335; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627,FlyMine:FBpp0082491,modMine:FBpp0082491; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0311415; name=Mf-PQ; parent=FBgn0038294,FBtr0345220; dbxref=FlyBase:FBpp0311415,FlyBase_Annotation_IDs:CG6803-PQ,GB_protein:AHN57334,REFSEQ:NP_001287335; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9VFC7, GH23305p OS=Drosophila melanogaster GN=Mf PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0082491 type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627,FlyMine:FBpp0082491,modMine:FBpp0082491; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311415 type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0311415; name=Mf-PQ; parent=FBgn0038294,FBtr0345220; dbxref=FlyBase:FBpp0311415,FlyBase_Annotation_IDs:CG6803-PQ,GB_protein:AHN57334,REFSEQ:NP_001287335; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0082491; name=Mf-PC; parent=FBgn0038294,FBtr0083032; dbxref=FlyBase:FBpp0082491,FlyBase_Annotation_IDs:CG6803-PC,GB_protein:AAN13627.1,REFSEQ:NP_731972,GB_protein:AAN13627,UniProt/TrEMBL:Q8I062,FlyMine:FBpp0082491,modMine:FBpp0082491; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:complement(join(15179039..15179129,15178280..15178489,15176364..15176433,15176158..15176293)); ID=FBpp0311415; name=Mf-PQ; parent=FBgn0038294,FBtr0345220; dbxref=FlyBase:FBpp0311415,FlyBase_Annotation_IDs:CG6803-PQ,GB_protein:AHN57334,REFSEQ:NP_001287335,UniProt/TrEMBL:Q8I062; MD5=ff7819b97d0c2a9675ffd7b0a77ea770; length=168; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 168 amino acids

    Gene Ontology:
    Cellular Component: A band [IDA]
    Biological Process: skeletal muscle thick filament assembly [NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKNHLEMIG RNESPSKKAK FWQSYIRSLK GSEDIRAHEA PRASRPYSSY LDSPSYRSIY  60
   61 DEPATANERV QSSGYRYLPV SRDTYGYSPR AIYDHHYSRT IPANYDAEKA WNDHLKRMQE 120
  121 IERRYPSRYG LYLRDKPLTP NSLVPLEYEP EDKLLAELNK GKDIKDIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle