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Protein Overview: Cad88C-PA

General Information:
Name(s) found: Cad88C-PA / FBpp0082424 [FlyBase]
Description(s) found:
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  • gi|28571710|ref|NP_731930.2| Cad88C [Drosophila melanogaster] [NCBI NR]
  • gi|28381297|gb|AAF55082.2| Cad88C [Drosophila melanogaster] [NCBI NR]
  • The gene Cad88C is referred to in FlyBase by the symbol Dmel\Cad88C (CG3389, FBgn0038247). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:10460475..10467334. It has the cytological map location 88C10. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: calcium ion binding. There is experimental evidence that it is involved in the biological process</span>: open tracheal system development. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG3389-PA translation from_gene[CG3389 Cad88C FBgn0038247] seq_release:3 mol_weight=224157 cds_boundaries:(3R:10,460,493..10,467,349[+]) aa_length:2002 transcript_info:[CG3389-RA seq_release:3] gene_info:[gene symbol:Cad88C FBgn0038247 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VFH5) CG3389-PA [DrosMelano7227.FASTAC.txt]
  • CG3389-PA [Drosophila melanogaster]gi|28571710|ref|NP_731930.2| CG3389-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(10460475..10460718,10461072..10462302,10462366..10462566,10462622..10464553,10464608..10464789,10464846..10465258,10465344..10466410,10466471..10466865,10466925..10467069,10467136..10467334); ID=FBpp0082424; name=Cad88C-PA; paren [fly-100309-contam.fasta]
  • CG3389-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Cad88C CG3389-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(10460475..10460718,10461072..10462302,10462366..10462566,10462622..10464553,10464608..10464789,10464846..10465258,10465344..10466410,10466471..10466865,10466925..10467069,10467136..10467334); ID=FBpp0082424; name=Cad88C-PA; parent=FBgn0038247,FBtr0082965; dbxref=FlyBase:FBpp0082424,FlyBase_Annotation_IDs:CG3389-PA,GB_protein:AAF55082.2,REFSEQ:NP_731930,GB_protein:AAF55082; MD5=22fa6b8abfce6aa24475e1da163cb88c; length=2002; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(10460475..10460718,10461072..10462302,10462366..10462566,10462622..10464553,10464608..10464789,10464846..10465258,10465344..10466410,10466471..10466865,10466925..10467069,10467136..10467334); ID=FBpp0082424; name=Cad88C-PA; parent=FBgn0038247,FBtr0082965; dbxref=FlyBase:FBpp0082424,FlyBase_Annotation_IDs:CG3389-PA,GB_protein:AAF55082.2,REFSEQ:NP_731930,GB_protein:AAF55082; MD5=22fa6b8abfce6aa24475e1da163cb88c; length=2002; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Cad88C OS=Drosophila melanogaster GN=Cad88C PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(10460475..10460718,10461072..10462302,10462366..10462566,10462622..10464553,10464608..10464789,10464846..10465258,10465344..10466410,10466471..10466865,10466925..10467069,10467136..10467334); ID=FBpp0082424; name=Cad88C-PA; parent=FBgn0038247,FBtr0082965; dbxref=FlyBase:FBpp0082424,FlyBase_Annotation_IDs:CG3389-PA,GB_protein:AAF55082.2,REFSEQ:NP_731930,GB_protein:AAF55082,FlyMine:FBpp0082424,modMine:FBpp0082424; MD5=22fa6b8abfce6aa24475e1da163cb88c; length=2002; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
    • Organism: Drosophila melanogaster
    Length: 2002 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISS]
    plasma membrane [IEA]
    Biological Process: calcium-dependent cell-cell adhesion [ISS]
    homophilic cell adhesion [IEA]
    open tracheal system development [IGI]
    Molecular Function: calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHNESQPPAN GNGIDSMDYK KVRLKGQRRR SFSSYISSIS IQVIILTTLI SLVASNRPPR  60
   61 FAIDGQSEIV LRLKESPETK VGTLIYTLKG YDPDNDPLTF GKRNSHDSEI IRIENTGGNE 120
  121 AKIFLAKELD RELQDEYAIV LTLTDSHYSD HNYVTQSFLL LVEDINDNVP TFLPYQNAIE 180
  181 IPEGSAPGVV STLEATDADE GAYGQVVYYL QELDGDNDVF SIATHQGKGI LRLQKELDYE 240
  241 RKSLYQLRVL AIDRANQGPI NTGTAAILVK VKDLEDQPPE FVEVQAVARI AEDAPVGTKV 300
  301 LRVRAIDGDR GINNPIAYSL EANDLFDINP HTGIVHTLTK LDREEQSDQV NGAHILRISA 360
  361 TELSKSNTQM APTTVRTEVT VIVSDVNDEI PTFGETVYRC EVNENAQTNT PLNFIDEEVQ 420
  421 NVVFDHDEGN NGTFRLFLDP PNDLFEIVPE LAVNEANFML RVKNSKSLDF EQFTEVNFTI 480
  481 FAREVDEPSR WSSAHVQIFI RDQNDNFPEF SQTIYNASVL ENSEQDTIIT HVQAVDVDSG 540
  541 DYGTMGIRYT NLRGGIAHLL NLNPITGVIT IKQAGGTAFD REIISRHYLT VEAIDNAGQG 600
  601 NRNTAQIIVD ILDVNDNAPT FPQRQYETKL LENQAEFETP LQLEARDADL NGTENSQVTY 660
  661 EIVEGLYRSN FTIDPQSGLL RPVHSFDFEE LVDGSSRRSD PYTGGSFSIR EIDLLVRARD 720
  721 SGIPMLSTVV PVLIYVQDVN DNAPIFQQSF YAKTVPEDLP GGSSVLQVTA IDRDGSAPNN 780
  781 VVVYRIQTGA GDKFIINSET GVISVAHGAN LDPDLTESKR SLYTLSVVRS KEIPFCRILK 840
  841 PFRNCLPQIA LDGGLGNSQL MTTCTVNISI QDVNNKPPVL KEMPALQILE NTPVGTLVYR 900
  901 IQATDLDHKA ILRYKLNPEH CEGRTEEGAL VKSSEYDFLG AFEVDSIEGT LKVVKLLDRE 960
  961 RVEHIKLAIT VEDLAAAKGR QIAEGFLSIQ VLDENDNNPK FRLPFYRQSI TENSINGAMI1020
 1021 VNVLASDVDK NRTITYALEG NPTYRSLMHL DPQTGEIVVA SKIDHEQHQW LNFSVRATDS1080
 1081 GIPARSSLVD VYITVLDEND NNPYFVGGSK NYTISENAAP GTRVATLQAG DADSGDFGKI1140
 1141 TFLMDRISSQ GKFTIDADTG VLTVADRLDR ESKDSYNLVI EAWDNYQFGF LAGESRNAFK1200
 1201 QVFISILDEN DNPPEVDLPM SCVLITEYHE LHERVASIVG KDADDPTTPN GRLDFAITRG1260
 1261 NKDGMFELRQ IDAWNAQIFA SKSLRNRYGN YSLTITTRDM GLPANIVHNT LDICVSDFND1320
 1321 HAPVFVRPLH NTTVRIPENA TVGTLILQAY ASDGDMGQNA LVRYRLKPDP LGSYKMFEVD1380
 1381 GSTGELFLKE QLNREKQKIH EIRIEAYDQG LPTSLSSDLD LTIYVRNVND YEPQFMVNEI1440
 1441 SVNFTEHSDP GSERIKLPDT IDKDQLELDD PNDTPSQVCY FIVNGNEAGY FRLDPETHIL1500
 1501 TVDRELDREV IANFTLYVRA TENCRNDSIS GGEKRRRMGI EINNRLGGIV HNQQFGYDRF1560
 1561 KHSRQLRSTE SNEYGPEDAE LLSYEAYDSS QEDPTGGLAT THPELDSTVI KVKVRVLDIN1620
 1621 DNPPRFRSKI FTGGITTNAD FGLKFMRVEA TDADEGDNGR IGYYQVGEIR QTLSEGLENV1680
 1681 RKAPFLLDQE TGEVQLNFDP QKGMKGYFDF VVLANDTSGM KDVAHVFIYL LREDQKVRFV1740
 1741 FRLQPDELRS RVDSFRDTLS NITESIVNID EIKVHENKDG SVDKTKTDLY MHLVEREDNS1800
 1801 IYEVSEVLKL IDSHIESLNG LFKELNVLDT QAAEAQLLTA GPSRGPLFVW LIFTNLFLAT1860
 1861 LLVVTIALCA SQRNGYRRQL RAAKVNIFRG HSSMSLQDAQ EPATRVPNTN KHSVQGSNPI1920
 1921 WLKGYDNEWF KSEESGSIGG HDSLDDNFLA VATQDMHETL KGTAKLFNNS NDLNRHFNLY1980
 1981 NQIDKMTNNA QILARKLETT EL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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