YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG7966-PA

General Information:
Name(s) found: CG7966-PA / FBpp0082183 [FlyBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • This gene is referred to in FlyBase by the symbol Dmel\CG7966 (CG7966, FBgn0038115). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:8875120..8877172. It has the cytological map location 87D10. Based on sequence similarity, it is predicted to have molecular function</span>: selenium binding. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: selenium binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKTCCRGP GYATPLDAMR SGPREKLLYT VTVQPNLDEP HGDYLSTVDV DPESPTYCQI  60
   61 VHRTFTNRKG DELHHSGWNA CSSCYYVDES SKTVPKRDRL VLPSLNSDFI YILDVVTDPR 120
  121 KPEIVKTIDG DVLKSHNVTA PHTTHCLANG NIMISVMGDA EGYAKGDFIL FDSDFNCIGT 180
  181 WTKGDKKALC GYDFWYQPYF DVMVSSEWGA PNKWRRGWKN VDLEDMSQYG CRLNFYKWST 240
  241 QTLYQTIDLG SDGITPLEIR FLHNPKKAEG FVGCALNAKV FHFKKKSDSD EFEAKKVIDI 300
  301 PGKLVDTGSG VAEDMGGMIS DIIISLDDRF LYVNCWRHGD VRQYDITDPE NPKLTGQLFL 360
  361 GGAICSDLPN VIVKEDKELK ERPPARYVKG RRLEGGPQML QLSLDGKRLY VSSSLYSPWD 420
  421 KQFYPKMVSQ GGHIVLIDVD TVNGGISLNE DFLVDFANEP YGPSLPHEMR YPGGDCTSDI 480
  481 WLANDA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 2.262934 View MSA. No confident structure predictions are available.
    2 View Details [188..486] PSI-BLAST 34.0 Surface layer protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.565955069185473 bayes_pls_golite062009
  • protein binding
    		•  0.188092612225384 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle