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Protein Overview: CG17327-PA, FBpp...

General Information:
Name(s) found: FBpp0307782 [FlyBase]
CG17327-PA / FBpp0082189 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=3R:complement(8822644..8823063); ID=FBpp0307782; name=CG17327-PC; parent=FBgn0038107,FBtr0336813; dbxref=FlyBase:FBpp0307782,FlyBase_Annotation_IDs:CG17327-PC,REFSEQ:NP_001262519,GB_protein:AGB95901; MD5=0be5351ec97ea674fb69862c6f263d28; length=139; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17327 (CG17327, FBgn0038107). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:8822590..8823404. It has the cytological map location 87D7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: aminoacyl-tRNA hydrolase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: translation. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 139 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEA]
    Molecular Function: aminoacyl-tRNA hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTSSSILQK FLSNGLAFGK STKLALVVRT DLKMSKGKTA AQCAHAAVMC YQSSVQGTKL  60
   61 QNAILQRWCR LGQPKIVLRV DNFEQLNSLE RQAQESNVVA ALVRDAGRTQ LESGTATVLG 120
  121 LGPAPAEDLD KLVAHLKLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] PSI-BLAST 47.522879 Crystal structure of bit1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.00445818053203 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle