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Protein Overview: CG31278-PA

General Information:
Name(s) found: CG31278-PA / FBpp0081795 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG31278 (CG31278, FBgn0051278). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:6533120..6534048. It has the cytological map location 86C4. Based on sequence similarity, it is predicted to have molecular function</span>: peptide deformylase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: translation. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEA]
    Molecular Function: iron ion binding [IEA]
    peptide deformylase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLKPRIKVC QAILGHCRSF GTSPPANQSF RKWYQHLWTT ERTNLPPYNH FTQIGDPVLR  60
   61 QQAALVPKEH MASPEIKAIV ERMVKVLRKF DCVGIAAPQI GVSLRIIAME FKGRIRKELP 120
  121 EAVYQARQMS ELPLTIFINP VLTVTNYAKL KHPEGCMSVR GYSAEVERFE GVKLTGLDQL 180
  181 GNQSELALSG WNARIAQHEM DHLEGKLYTD HMDRSTFACT CWEAVNTKSG RVEIPFYK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 52.69897 X-ray structure of peptide deformylase from Arabidopsis thaliana (AtPDF1A); crystals grown in PEG-5000 MME as precipitant


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle