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Protein Overview: FBpp0305396, CG9...

General Information:
Name(s) found: FBpp0305396 [FlyBase]
CG9444-PA / FBpp0081577 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=3R:complement(5507244..5507633,5507692..5507997,5508058..5508263,5508326..5508600,5508660..5508888,5509370..5509603,5509672..5509705); ID=FBpp0305396; name=CG9444-PB; parent=FBgn0037730,FBtr0333194; dbxref=REFSEQ:NP_001262431,GB_protein:AGB95813,FlyBase:FBpp0305396,FlyBase_Annotation_IDs:CG9444-PB; MD5=5b16a7ea3f9a4affa5f4e9c65f1c78de; length=557; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9444 (CG9444, FBgn0037730). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5507244..5509745. It has the cytological map location 85E4. Based on sequence similarity, it is predicted to have molecular function</span>: proton-dependent oligopeptide secondary active transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oligopeptide transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 557 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: oligopeptide transport [IEA]
    Molecular Function: proton-dependent oligopeptide secondary active transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRATEIGSE ETLPALAELS QVGYERDARD VEWVAWRGER AQLKLAHRSS LPNYGFAPPT  60
   61 IRMKYRYPRA VFFVLATKFF EAFAANGIRT VLALYLRDDL NFTESFSTVV LHIFNFFGQF 120
  121 CPIIGAILAD SYIGNVRTIS GFSFIYAFGW LLLTLTSLPA MGLPMVLLVS IALLFIAVGN 180
  181 GSIRACITSL GALQFKLPEQ SVHLAEYFSF YYFVYYFGIF LSKILPPLVR ANTQCFDKAE 240
  241 CYPAVFGTLG AAFMMAWFIF LVGKWFYKSE KLSDDNILFK FCGCIKTALV EKWRRRKSTK 300
  301 RSNYWLHNAV VAYDMGFVND VSRVLRISKL FIPLPFYFAL LAQQDSSWTF QATQMNTTLM 360
  361 GVTIQPDQAK AVGPIFLFML IPLWQYITVP LLRRYFNWEL QPLHSVTVGG IFSAGAFFCA 420
  421 GALQERIKNS PPQTVNIAWQ LPQFLLLMMG ELLLSIPGLQ FAFTQAPTSM KSVVTAAWFL 480
  481 NNAFGNLIVV LVTELGMLSS QMAEYFFYAV VMLVCIILYA LLAFDYTLQE RKAGMYVRMD 540
  541 SEAEDRDVPS TSRSGSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..557] PSI-BLAST 20.09691 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.54286095434601 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.01247278444729 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.77039368764865 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.66673693200184 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.33203350453105 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.24475883286552 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.2309068592963 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.18188709249385 bayes_pls_golite062009
  • binding
    		•  0.105551689569449 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  1.26964387230144E-4 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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