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Protein Overview: CG16790-PA

General Information:
Name(s) found: CG16790-PA / FBpp0081590 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG16790 (CG16790, FBgn0037713). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5394796..5395936. It has the cytological map location 85D25. There is experimental evidence that it has the molecular function</span>: protein binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: RNA metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 258 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: RNA metabolic process [IEA]
    Molecular Function: protein binding [IPI]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVDYGGSS SSASEDEDCT ENIQTPALIT LKRPALPKAA TLLGPKKPKP EEFVEDVVDD  60
   61 PAEHGGRMRS FKHERGNWAT YVYVPATACV DQLEEFQTEA IARLEPHLEL QPNESLHLSL 120
  121 SRTVVLQYHQ IDEFSRSLQS ALNSSAGFAA TLQGLRIYTN EERTRTFIAA PLDAAFVEKM 180
  181 TAILQPIDQV MLDYRLQQFY DPASFHVSLL WCVGDQETLL NEKLTELKEL LDDQDKLCLA 240
  241 VNEVHLKCGN KDFTYSLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..258] FFAS03 4.73 2'-5' RNA ligase LigT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.323890296968392 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle