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Protein Overview: CG8176-PA, FBpp0...

General Information:
Name(s) found: FBpp0306712 [FlyBase]
CG8176-PA / FBpp0081543 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=3R:join(5347043..5347072,5347138..5347698,5347762..5347957,5348017..5348613,5349924..5350029,5350104..5350444,5350503..5350675,5350742..5351475,5351531..5351866,5351936..5352165,5352228..5352325); ID=FBpp0306712; name=CG8176-PE; parent=FBgn0037702,FBtr0334650; dbxref=FlyBase:FBpp0306712,FlyBase_Annotation_IDs:CG8176-PE,REFSEQ:NP_788613,GB_protein:AAF54392; MD5=75084910a362c7adc5e860ab47a94bbb; length=1133; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8176 (CG8176, FBgn0037702). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5341758..5352964. It has the cytological map location 85D19. Its molecular function is unknown. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1133 amino acids

    Gene Ontology:
    Cellular Component: clathrin adaptor complex [IEA]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVDFNDYFW GEKNNGYDVL YHNMKFGLIA SKELSEFLRE KSNIEEQNSK MMSKLAHKAG  60
   61 TLNSTFAPVW TILRTSAEKL STLHLQMVQK LTELVKDVAK YADELHKKHK SVKEEESQTL 120
  121 ECVQAIQTST VAVQKLRDLY ASKVQELEKL RKDNGSHKDA EKLESKLKKL QEEYKALLDK 180
  181 HNPIKNEFER RMTQTCKRFQ EIEEVHLRQM KEFLSTYLEM LQNNHDMVGQ VHSDFKRQFV 240
  241 DMSVDKLLEQ FVLNKYTGLE KPEMPELEYV ALSSGSRLQQ PQVSASASNS NSATSIQAAL 300
  301 RAGNAATTAS GSAVSMDQRG DALAAISLGS GSAASGSIPF AEDPILGAMG SPRPTSPDML 360
  361 AGANASGIQS QPTGGATSTV KSLRSWFLPT AKQQPSAGAG NFGMAGSGST NNTTTTTTAS 420
  421 NNSNNLNTNN TTATTTTTTG TNNLTTNITK NSPNSEDTSN QVSGILRSRR DKTKTKKAKK 480
  481 KKDNEAAENI QEERLTSLDR GNNTLLDYDD HGRSMKTQNS SGSSAGGGLA ALSVTSAQGS 540
  541 VDSAGASSMG GSGGAAVASG SLPNAGALTN SASITAPGAA SGTGTGYEVD EEGFSIQPAK 600
  601 EIAWEEGQDK SGSFYSDSDT DSDNDKQERR IHVSIKPLKN GQAPMSASVD ELRATVENIS 660
  661 LSPTGVFSHH SQQLQAARGA PASRQQSPEI SNASTPTASV HPYAPLQSPT LSNNNNANNT 720
  721 TNSRYADLGD IFSELGDMSM SAPSSATLGK PPGRQIPTPT SASTGGSIAI PRPPSRRSDM 780
  781 IAIGPAATGT APGRGRMSPA PVTAMNRAES IGSLEFRTAI GGVGSSRGPS PLTIGISDTI 840
  841 PLAVAFHEII HAYFRGSDES RCQVKVSGDM MLSFPAGIAG LLANNPNPAK LGFRIKHVQN 900
  901 LENLVPNGKL VQIDRQQSSS VSTMLEFNMG ALTALLRRQA ENNPTASYFN VDILKYQVRT 960
  961 KPGASSCPFQ LVSYWKCESS YTALKVDYKY NNHAMASASP LLNVTLSVPV NGSVRNVQSK1020
 1021 PHSAWLGESN RLVWNFTDIS QNSQDGGVGT LRARLELNDG PSTPALLATQ FNCEGTTLSG1080
 1081 IEFELQGSGY RLSLVKRRFV SGKYVCEGDG IRSGATPTPP SVGSTSPYSA KSN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..292] PSI-BLAST 56.39794 No description for 2v0oA was found.
    2 View Details [293..430] deduced N/A No confident structure predictions are available.
    3 View Details [431..561] deduced N/A No confident structure predictions are available.
    4 View Details [562..715] deduced N/A No confident structure predictions are available.
    5 View Details [716..817] deduced N/A No confident structure predictions are available.
    6 View Details [818..1133] FFAS03 1.96 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor; Mu2 adaptin (clathrin coat assembly protein AP50)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle