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Protein Overview: D1-PD, D1-PC, D1-PA

General Information:
Name(s) found: D1-PD / FBpp0290739 [FlyBase]
D1-PA / FBpp0081468 [FlyBase]
D1-PC / FBpp0081467 [FlyBase]
Description(s) found:
Found 54 descriptions.
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  • The gene D1 chromosomal protein is referred to in FlyBase by the symbol Dmel\D1 (CG9745, FBgn0000412). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5063805..5066376. It has the cytological map location 85D1. There is experimental evidence that it has the molecular function</span>: satellite DNA binding. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene D1 chromosomal protein is referred to in FlyBase by the symbol Dmel\D1 (CG9745, FBgn0000412). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5063805..5066376. It has the cytological map location 85D1. There is experimental evidence that it has the molecular function</span>: satellite DNA binding. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene D1 chromosomal protein is referred to in FlyBase by the symbol Dmel\D1 (CG9745, FBgn0000412). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:5063805..5066376. It has the cytological map location 85D1. There is experimental evidence that it has the molecular function</span>: satellite DNA binding. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 355 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][NAS]
    Biological Process: NONE FOUND
    Molecular Function: double-stranded DNA binding [NAS]
    AT DNA binding [NAS]
    satellite DNA binding [IDA][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVAVKKRG RPSKASVGGK SSTAAVAAIS PGIKKRGRPA KNKGSSGGGG QRGRPPKASK  60
   61 IQNDEDPEDE GEEDGDGDGS GAELANNSSP SPTKGRGRPK SSGGAGSGSG DSVKTPGSAK 120
  121 KRKAGRPKKH QPSDSENEDD QDEDDDGNSS IEERRPVGRP SAGSVNLNIS RTGRGLGRPK 180
  181 KRAVESNGDG EPQVPKKRGR PPQNKSGSGG STGYVPTGRP RGRPKANAAP VEKHEDNDDD 240
  241 QDDENSGEEE HSSPEKTVVA PKKRGRPSLA AGKVSKEETT KPRSRPAKNI DDDADDADSA 300
  301 DQGQHNSKKE SNDEDRAVDG TPTKGDGLKW NSDGENDAND GYVSDNYNDS ESVAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..355] MSA 3.147996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle