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Protein Overview: gi|23170756, gi|...

General Information:
Name(s) found: gi|24645238 [NCBI NR]
gi|24645236 [NCBI NR]
gi|24645234 [NCBI NR]
gi|23170758 [NCBI NR]
gi|23170757 [NCBI NR]
gi|23170756 [NCBI NR]
Description(s) found:
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  • gi|24645238|ref|NP_731306.1| CG11984, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|24645236|ref|NP_649861.2| CG11984, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24645234|ref|NP_731305.1| CG11984, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|23170758|gb|AAF54325.2| CG11984, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|23170757|gb|AAF54323.2| CG11984, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|23170756|gb|AAF54324.2| CG11984, isoform A [Drosophila melanogaster] [NCBI NR]
  • >CG11984-PA translation from_gene[CG11984 CG11984 FBgn0037655] seq_release:3 mol_weight=67640 cds_boundaries:(3R:4,836,413..4,839,068[-]) aa_length:643 transcript_info:[CG11984-RA seq_release:3] gene_info:[gene symbol:CG11984 FBgn0037655 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG11984-PC translation from_gene[CG11984 CG11984 FBgn0037655] seq_release:3 mol_weight=67640 cds_boundaries:(3R:4,836,413..4,839,068[-]) aa_length:643 transcript_info:[CG11984-RC seq_release:3] gene_info:[gene symbol:CG11984 FBgn0037655 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG11984-PB translation from_gene[CG11984 CG11984 FBgn0037655] seq_release:3 mol_weight=67640 cds_boundaries:(3R:4,836,413..4,839,068[-]) aa_length:643 transcript_info:[CG11984-RB seq_release:3] gene_info:[gene symbol:CG11984 FBgn0037655 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VHI5) CG11984-PA [DrosMelano7227.FASTAC.txt]
  • CG11984-PC, isoform C [Drosophila melanogaster]gi|23170757|gb|AAF54323.2| CG11984-PB, isoform B [Drosophila melanogaster]gi|23170756|gb|AAF54324.2| CG11984-PA, isoform A [Drosophila melanogaster]gi|24645236|ref|NP_649861.2| CG11984-PB [Drosophila melan [nrdb_11152004_Chlamydomonas]
  • CG11984-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11984-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11984-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
    • Organism: Drosophila melanogaster
    Length: 643 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    potassium channel regulator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRHEGVSCD SCLKSNFNGR RYKCLICYDY DLCADCYEDG VTSTRHLVEH PMQCILTRSD  60
   61 IELYFGGEML ASDQPQSFTC PYCKKMGFSD ATLLEHVSAE HTETSLEVVC PVCAGLPGGE 120
  121 PNLVTDDFAG HLTLEHRQGP RELISFLISF FKQTHHTLIA RNAQLHPYKR LVLASYKYKS 180
  181 NHLVALTCRQ YDEPSAIRHG GGVRRIPGRT LGGPRTRRSN MHFSSSSGLS ALSPSGRESV 240
  241 DPIAELLSQL SGVRRGGPPT SQLQQLQMQM QLDRQQVTAS RQIDRLPRRA HPIVSTSNSN 300
  301 AAMAEVISGG AGGSGGSGAV GSGSGGGSGA TAPPNLRTTE WPVTASFSTS ASNHSQTQSS 360
  361 LAANSLNARE AIGTSSSAGS NVLGISVGVG GTANGNGGAG SSGVATGAGG AGQGGGQGGA 420
  421 AAGESFLLAQ FMQPTFTEAE WAVVESMRAD RSMFVQSLML SMLCTEALDL NASDESLAKS 480
  481 DNVNKGQQQQ QEDAEAEAQA ETLLNNNADV EQQQQQQQLQ PAMVRQVNQM QQTSPEDFVC 540
  541 DEYRYKNKKA NTTQTSGTGG LGGAGATAAP GGGASGAGTK PTADRGIERR SGRPPPGEMA 600
  601 TGSQQPQQQQ QSTANPAASQ QKYKQNASAA TAAGNTNQIP DTR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 13.69897 No description for 2dipA was found.
    2 View Details [76..165] FFAS03 1.1 No description for 2ghfA was found.
    3 View Details [166..253] deduced N/A No confident structure predictions are available.
    4 View Details [254..416] MSA 5.130996 View MSA. No confident structure predictions are available.
    5 View Details [417..643] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle