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Protein Overview: Ir85a-PA

General Information:
Name(s) found: Ir85a-PA / FBpp0081400 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene Ionotropic receptor 85a is referred to in FlyBase by the symbol Dmel\Ir85a (CG11775, FBgn0037630). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:4620406..4622367. It has the cytological map location 85B1. Based on sequence similarity, it is predicted to have molecular function</span>: extracellular-glutamate-gated ion channel activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: NONE FOUND
    Molecular Function: extracellular-glutamate-gated ion channel activity [IEA][ISS]
    ionotropic glutamate receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIQWLKHIL LLAILVNLAG TRENHIPLDL KKSSIVMVKM SQILCKARIK VLFVYFENQT  60
   61 SHEHTGQILK EVTKCDISNQ NTPLEAVKDD GILMYMVMIT TNISQPLELS LIRKKSAAKH 120
  121 RSHVFLLVRD ADTVSDAWMR ASFRQFWKIW LLNIVILYWR DGRLNAYRYN PFMDNYLIPV 180
  181 DNKPNEVPTL EQLFPKTIPN MQRKPLRMCI YKDDVRAIFW RQGTILGTDG LLAAYVAERL 240
  241 NATMMITRPH SYNNHNLSSD ICFLEVAKEY VDVAMNIRFL VPDTFRKQAE STVSHTRDDL 300
  301 CVIVPKAKTA PTFWNIFRSF GSLVWALILV SVLVANVFCY ILKSEVGRVP MQLFAGALTM 360
  361 PMTQIPPNHS IRLFLIFWLY FGLLICSAFK GNLTSMMVFQ PYLPDINQLG ALARSHYHII 420
  421 IRPRHVKHIQ HFLTLGHKHE SRIREQMLEV SDTQMYEMMR NNDIRFAYLE KYHIARFQVN 480
  481 SRVHMHLGRP LFHLMNSCLV PFHAVYIVPY GSPYLGFLDS LIRSSHEFGF ERYWDRIMNS 540
  541 AFIKSGVKVV NRRRGSGNDE PVVLKLQHFH AVFALWLVGI GMACIVLAWE HLTHNYNLAV 600
  601 TKRRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] MSA 1.352997 View MSA. No confident structure predictions are available.
    2 View Details [196..605] PSI-BLAST 39.69897 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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