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Protein Overview: FBpp0308770, CG2...

General Information:
Name(s) found: FBpp0308770 [FlyBase]
CG2943-PA / FBpp0081262 [FlyBase]
Description(s) found:
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  • gi|7298957|gb|AAF54161.1| CG2943 [Drosophila melanogaster] [NCBI NR]
  • gi|24644923|ref|NP_649747.1| CG2943 [Drosophila melanogaster] [NCBI NR]
  • gi|162951753|gb|ABY21738.1| LD19064p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3R:complement(3729155..3729315,3729378..3729611,3729676..3729846,3729914..3730066,3730126..3730327,3730386..3730463,3730524..3730718,3730773..3731107,3731413..3731433,3731507..3731819,3731903..3732049,3732140..3732782,3732850..3732944); ID=FBpp0308770; name=CG2943-PB; parent=FBgn0037530,FBtr0339713; dbxref=FlyBase:FBpp0308770,FlyBase_Annotation_IDs:CG2943-PB; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG2943 (CG2943, FBgn0037530). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:3728975..3733088. It has the cytological map location 84E4-84E5. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG2943-PA translation from_gene[CG2943 CG2943 FBgn0037530] seq_release:3 mol_weight=100917 cds_boundaries:(3R:3,729,173..3,732,959[-]) aa_length:915 transcript_info:[CG2943-RA seq_release:3] gene_info:[gene symbol:CG2943 FBgn0037530 gene_boundaries:(3 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VHY6) CG2943 protein [DrosMelano7227.FASTAC.txt]
  • (AE003676) CG2943 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG2943-PA [Drosophila melanogaster]gi|24644923|ref|NP_649747.1| CG2943-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(3729155..3729315,3729378..3729611,3729676..3729846,3729914..3730066,3730126..3730327,3730386..3730463,3730524..3730718,3730773..3731107,3731413..3731433,3731507..3731819,3731903..3732049,3732140..3732782,3732850..3732944); [fly-100309-contam.fasta]
  • CG2943-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(3729155..3729315,3729378..3729611,3729676..3729846,3729914..3730066,3730126..3730327,3730386..3730463,3730524..3730718,3730773..3731107,3731413..3731433,3731507..3731819,3731903..3732049,3732140..3732782,3732850..3732944); ID=FBpp0081262; name=CG2943-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(3729155..3729315,3729378..3729611,3729676..3729846,3729914..3730066,3730126..3730327,3730386..3730463,3730524..3730718,3730773..3731107,3731413..3731433,3731507..3731819,3731903..3732049,3732140..3732782,3732850..3732944); ID=FBpp0081262; name=CG2943-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG2943 OS=Drosophila melanogaster GN=CG2943 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(3729155..3729315,3729378..3729611,3729676..3729846,3729914..3730066,3730126..3730327,3730386..3730463,3730524..3730718,3730773..3731107,3731413..3731433,3731507..3731819,3731903..3732049,3732140..3732782,3732850..3732944); ID=FBpp0081262; name=CG2943-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161,FlyMine:FBpp0081262,modMine:FBpp0081262; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0081262; name=CG2943-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161,FlyMine:FBpp0081262,modMine:FBpp0081262; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0308770; name=CG2943-PB; parent=FBgn0037530,FBtr0339713; dbxref=GB_protein:AHN57214,FlyBase:FBpp0308770,FlyBase_Annotation_IDs:CG2943-PB,REFSEQ:NP_001287215; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0081262; name=EMC1-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161,FlyMine:FBpp0081262,modMine:FBpp0081262; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0308770; name=EMC1-PB; parent=FBgn0037530,FBtr0339713; dbxref=GB_protein:AHN57214,FlyBase:FBpp0308770,FlyBase_Annotation_IDs:CG2943-PB,REFSEQ:NP_001287215; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG2943, isoform A OS=Drosophila melanogaster GN=EMC1 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0081262 type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0081262; name=EMC1-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161,FlyMine:FBpp0081262,modMine:FBpp0081262; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308770 type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0308770; name=EMC1-PB; parent=FBgn0037530,FBtr0339713; dbxref=GB_protein:AHN57214,FlyBase:FBpp0308770,FlyBase_Annotation_IDs:CG2943-PB,REFSEQ:NP_001287215; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0081262; name=EMC1-PA; parent=FBgn0037530,FBtr0081765; dbxref=FlyBase:FBpp0081262,FlyBase_Annotation_IDs:CG2943-PA,GB_protein:AAF54161.1,REFSEQ:NP_649747,GB_protein:AAF54161,UniProt/TrEMBL:Q9VHY6,FlyMine:FBpp0081262,modMine:FBpp0081262; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:complement(join(7907128..7907222,7906418..7907060,7906181..7906327,7905785..7906097,7905691..7905711,7905051..7905385,7904802..7904996,7904664..7904741,7904404..7904605,7904192..7904344,7903954..7904124,7903656..7903889,7903433..7903593)); ID=FBpp0308770; name=EMC1-PB; parent=FBgn0037530,FBtr0339713; dbxref=GB_protein:AHN57214,FlyBase:FBpp0308770,FlyBase_Annotation_IDs:CG2943-PB,REFSEQ:NP_001287215,UniProt/TrEMBL:Q9VHY6; MD5=af15c61db06d406e7fce959f9a356489; length=915; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 915 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEKWLLPAL SLALLLGTCS ALYEDQIKKF DWRGVNVGAL KQSRVDLNHF QPRILVTTYE  60
   61 GVVASLCVKT GELVWRQVLE QKPRGDVKLL QVSGFADDSS DTAAAPMGSN MGFDMLTVQG 120
  121 HAPALVRGWN TNMGALEWEW SIMPMNTERA QDAMWIYSKS VLYHVLPAWR SHLEVTAYFA 180
  181 SSGHSTGSTS KVIAPWITSE SCTLSGTFYV CTDGKQLISL DLVSKSGQVI RTSLEAEPKG 240
  241 KTQALTGLNG VVIVDGKPIS VNKDQSICGD LRSSSFAVGS FNYRKVLAYA DLSSGILRIN 300
  301 ALYLDNCAPA AELEQSLPFP EHFGTPSLSN FDCKQKRNGE GKNCLFLFSS TSESIVAVQH 360
  361 GRVRWSREES LANVIDSQFV DLPLADTEGT LENEMKGKAG DFTSFERDIA SAFLRRITTQ 420
  421 AVQIRSLFLH VIGLGPPPTD TQRAGLVRDS FGLHKMLVLL TRAGKIFGID NVSGKHHWQL 480
  481 HLPNVIGFAN DEQMRLIVQR SAKHFPLQPL CTILGKNAVS GNGVLYRFNP ITGKVAEGGL 540
  541 VQLDYRIKQL SLLGETEKDF LKGILLLDAS NKVHVYPEHA APLADGMYLY TADLKTAELA 600
  601 GYFVKYAGGQ LSSTHIWNAR LGGHNSEQQI IGVAGKNPIE HVHSQGRVLG DRSVLYKYIN 660
  661 PNLVAFVTQA PDSTHKSVLN LYLVDVVSGS VVFTMTHRKV RAPLSIVHSE NWLAYSYFNE 720
  721 KLRRTEITTI ELYEGKSQAN SSVWSSLQAP PMPLVERQSY ILPTIVEALR ETITERGITN 780
  781 KHVLIGTASG SIVEMPWHLL DPRRPIASTT QGREEGAIPY IPELPLPTES HINYNQTVAR 840
  841 LRNIYTAPSG LESTCLVVAT GLDLFVTRVA PSKTFDLLKE DFDYILISIV LVALTSGSLI 900
  901 VKHLASRKLL KQAWK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..543] PSI-BLAST 27.30103 Molecular cloning and structural analysis of quinohemoprotein alcohol dehydrogenase ADHIIG from Pseudomonas putida HK5. Compariison to the other quinohemoprotein alcohol dehydrogenase ADHIIB found in the same microorganism.
    2 View Details [544..768] deduced N/A No confident structure predictions are available.
    3 View Details [769..915] MSA 2.05096 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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