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Protein Overview: nxf4-PA

General Information:
Name(s) found: nxf4-PA / FBpp0081102 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • The gene nuclear export factor 4 is referred to in FlyBase by the symbol Dmel\nxf4 (CG31501, FBgn0051501). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:3172555..3173558. It has the cytological map location 84D5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: RNA export from nucleus. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA export from nucleus [ISS]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFATPRNNSS EGPLCHSTPR SVKGDFKFES KNGARLPRSI YGWYRVLIYS TDRRLTFNRV  60
   61 LRRIRCILTP LKINPRYKHT GGEQDTAEDS WALFTFFVDS YDVASALFRR GWVDNQIWLK 120
  121 VSDRMPKIWI NSILRLHLTM VLLDRYDPVE RSLDLTLFYK DKALCGEFFA LAESNCMSTV 180
  181 LGIVDREMPE LERLILDGNH LTNLWVFRKV ERRFPRLHSI SLKHNDIENI YSLRNLQFLP 240
  241 LAELNLLDNP LPAGYEKEVL DIWPSLQVLN KIQVTPDPAM MQLVERVLQH TGTKREFFRF 300
  301 F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..301] PSI-BLAST 33.522879 mRNA export factor tap

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  0.326090824785046 bayes_pls_golite062009
  • binding
    		•  0.08318875321557 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle