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Protein Overview: CG1239-PA, FBpp0...

General Information:
Name(s) found: FBpp0310438 [FlyBase]
FBpp0310437 [FlyBase]
CG1239-PA / FBpp0078369 [FlyBase]
Description(s) found:
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  • gi|75027244|sp|Q9VNH1.2|BN3D2_DROME RecName: Full=Probable methyltransferase CG1239 [NCBI NR]
  • gi|223967065|emb|CAR93269.1| CG1239-PA [Drosophila melanogaster] [NCBI NR]
  • gi|21357335|ref|NP_649577.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|16769724|gb|AAL29081.1| LP01332p [Drosophila melanogaster] [NCBI NR]
  • gi|116812043|emb|CAL26188.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|116812041|emb|CAL26187.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|116812037|emb|CAL26185.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|116812035|emb|CAL26184.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|116812033|emb|CAL26183.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|116812029|emb|CAL26181.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|116812021|emb|CAL26177.1| CG1239 [Drosophila melanogaster] [NCBI NR]
  • gi|10727159|gb|AAF51965.2| CG1239 [Drosophila melanogaster] [NCBI NR]
  • Probable RNA methyltransferase CG1239 OS=Drosophila melanogaster GN=CG1239 PE=2 SV=2 [Swiss-Prot]
  • type=protein; loc=3R:join(1559417..1560154,1560224..1560388); ID=FBpp0310438; name=CG1239-PC; parent=FBgn0037368,FBtr0343989; dbxref=FlyBase:FBpp0310438,FlyBase_Annotation_IDs:CG1239-PC; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:join(1559417..1560154,1560224..1560388); ID=FBpp0310437; name=CG1239-PB; parent=FBgn0037368,FBtr0343988; dbxref=FlyBase:FBpp0310437,FlyBase_Annotation_IDs:CG1239-PB; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1239 (CG1239, FBgn0037368). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1559263..1560424. It has the cytological map location 83C1. Based on sequence similarity, it is predicted to have molecular function</span>: polynucleotide adenylyltransferase activity. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG1239-PA translation from_gene[CG1239 CG1239 FBgn0037368] seq_release:3 mol_weight=34725 cds_boundaries:(3R:1,559,414..1,560,382[+]) aa_length:300 transcript_info:[CG1239-RA seq_release:3] gene_info:[gene symbol:CG1239 FBgn0037368 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VNH1) CG1239 protein (LP01332p) [DrosMelano7227.FASTAC.txt]
  • (AE003602) CG1239 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG1239-PA [Drosophila melanogaster]gi|16769724|gb|AAL29081.1| LP01332p [Drosophila melanogaster]gi|21357335|ref|NP_649577.1| CG1239-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(1559417..1560154,1560224..1560388); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965; MD5=70c2b [fly-100309-contam.fasta]
  • CG1239 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LP01332p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG1239-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(1559417..1560154,1560224..1560388); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(1559417..1560154,1560224..1560388); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Probable methyltransferase CG1239 OS=Drosophila melanogaster GN=CG1239 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • CG1239-PA OS=Drosophila melanogaster GN=CG1239 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(1559417..1560154,1560224..1560388); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965,FlyMine:FBpp0078369,modMine:FBpp0078369; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965,FlyMine:FBpp0078369,modMine:FBpp0078369; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310437; name=CG1239-PB; parent=FBgn0037368,FBtr0343988; dbxref=GB_protein:AHN57184,REFSEQ:NP_001287185,FlyBase:FBpp0310437,FlyBase_Annotation_IDs:CG1239-PB; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310438; name=CG1239-PC; parent=FBgn0037368,FBtr0343989; dbxref=GB_protein:AHN57185,REFSEQ:NP_001287186,FlyBase:FBpp0310438,FlyBase_Annotation_IDs:CG1239-PC; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965,FlyMine:FBpp0078369,modMine:FBpp0078369; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310437; name=CG1239-PB; parent=FBgn0037368,FBtr0343988; dbxref=GB_protein:AHN57184,REFSEQ:NP_001287185,FlyBase:FBpp0310437,FlyBase_Annotation_IDs:CG1239-PB; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310438; name=CG1239-PC; parent=FBgn0037368,FBtr0343989; dbxref=GB_protein:AHN57185,REFSEQ:NP_001287186,FlyBase:FBpp0310438,FlyBase_Annotation_IDs:CG1239-PC; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q9VNH1, CG1239, isoform B OS=Drosophila melanogaster GN=CG1239 PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0078369 type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965,FlyMine:FBpp0078369,modMine:FBpp0078369; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310437 type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310437; name=CG1239-PB; parent=FBgn0037368,FBtr0343988; dbxref=GB_protein:AHN57184,REFSEQ:NP_001287185,FlyBase:FBpp0310437,FlyBase_Annotation_IDs:CG1239-PB; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310438 type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310438; name=CG1239-PC; parent=FBgn0037368,FBtr0343989; dbxref=GB_protein:AHN57185,REFSEQ:NP_001287186,FlyBase:FBpp0310438,FlyBase_Annotation_IDs:CG1239-PC; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0078369; name=CG1239-PA; parent=FBgn0037368,FBtr0078720; dbxref=FlyBase:FBpp0078369,FlyBase_Annotation_IDs:CG1239-PA,GB_protein:AAF51965.2,REFSEQ:NP_649577,GB_protein:AAF51965,UniProt/Swiss-Prot:Q9VNH1,FlyMine:FBpp0078369,modMine:FBpp0078369; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310437; name=CG1239-PB; parent=FBgn0037368,FBtr0343988; dbxref=GB_protein:AHN57184,REFSEQ:NP_001287185,FlyBase:FBpp0310437,FlyBase_Annotation_IDs:CG1239-PB,UniProt/Swiss-Prot:Q9VNH1; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:join(5733695..5734432,5734502..5734666); ID=FBpp0310438; name=CG1239-PC; parent=FBgn0037368,FBtr0343989; dbxref=GB_protein:AHN57185,REFSEQ:NP_001287186,FlyBase:FBpp0310438,FlyBase_Annotation_IDs:CG1239-PC,UniProt/Swiss-Prot:Q9VNH1; MD5=70c2b925bbf83f841b04c664c0e97811; length=300; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: methyltransferase activity [IEA]
    polynucleotide adenylyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLENNNNTP LTGKQAEKCA KKRKCVITLD EKQVESKRLK KEESNVEATS RPPAQSPKKR  60
   61 LHLNGKPMQN KDLNFKYGNY KHYYGKRILN KDFHDIRLDV LGTQPDLFRN KQLLDIGCNS 120
  121 GHLSIQIARK FEVKSLVGLD IDRGLINDAQ KTVSHLKRHA TPGQGIPHIQ FVHGNYVLED 180
  181 DVLLEIERPQ FDVILCLSVT KWIHLNFCDS GLKQAFRRMY LQLRPGGKLI LEPQSFDGYK 240
  241 RRKKLSEQIR DNYNAIKFRP DHFTEYLLSP EVGFAEMKLM GIPEHCKVGF KRPIQIFTKS 300
  301

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] PSI-BLAST 10.30103 Crystal Structure of RlmA(I) enzyme: 23S rRNA n1-G745 methyltransferase (NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET ER19)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle