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Protein Overview: sec23-PA, FBpp03...

General Information:
Name(s) found: FBpp0308424 [FlyBase]
FBpp0303346 [FlyBase]
sec23-PA / FBpp0078360 [FlyBase]
sec23-PB / FBpp0078359 [FlyBase]
Description(s) found:
Found 44 descriptions.
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  • type=protein; loc=3R:join(1475104..1475382,1475442..1476691,1476754..1476907,1476976..1477524,1478103..1478192); ID=FBpp0308424; name=Sec23-PH; parent=FBgn0262125,FBtr0339320; dbxref=FlyBase:FBpp0308424,FlyBase_Annotation_IDs:CG1250-PH; MD5=e1ae7f1fbbe2747f9ad1581afe53e349; length=773; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:join(1475104..1475382,1475442..1476691,1476754..1476907,1476976..1477524,1478103..1478192); ID=FBpp0303346; name=Sec23-PG; parent=FBgn0262125,FBtr0330314; dbxref=FlyBase:FBpp0303346,FlyBase_Annotation_IDs:CG1250-PG,REFSEQ:NP_001262294,GB_protein:AGB95677; MD5=e1ae7f1fbbe2747f9ad1581afe53e349; length=773; release=r5.56; species=Dmel; [FlyBase]
  • The gene sec23 is referred to in FlyBase by the symbol Dmel\sec23 (CG1250, FBgn0037357). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1474787..1478354. It has the cytological map location 83B7-83B8. Based on sequence similarity, it is predicted to have molecular function</span>: GTPase activator activity. There is experimental evidence that it is involved in the biological process</span>: Golgi organization; chitin-based larval cuticle pattern formation; negative regulation of dendrite morphogenesis; larval chitin-based cuticle development. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene sec23 is referred to in FlyBase by the symbol Dmel\sec23 (CG1250, FBgn0037357). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1474787..1478354. It has the cytological map location 83B7-83B8. Based on sequence similarity, it is predicted to have molecular function</span>: GTPase activator activity. There is experimental evidence that it is involved in the biological process</span>: Golgi organization; chitin-based larval cuticle pattern formation; negative regulation of dendrite morphogenesis; larval chitin-based cuticle development. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 773 amino acids

    Gene Ontology:
    Cellular Component: ER to Golgi transport vesicle [TAS]
    endoplasmic reticulum [IDA]
    Golgi stack [IDA]
    COPII vesicle coat [IEA]
    Biological Process: negative regulation of dendrite morphogenesis [IMP]
    ER to Golgi vesicle-mediated transport [ISS]
    chitin-based larval cuticle pattern formation [IMP]
    larval chitin-based cuticle development [IMP]
    Golgi organization [IGI]
    intracellular protein transport [IEA]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]
    GTPase activator activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTYEEFIQQ NEDRDGVRLT WNVWPSSRIE ASRLVVPLAC LYQPLKERPD LPPIQYEPVL  60
   61 CTRSNCRAIL NPLCQVDYRA KLWVCNFCFQ RNPFPPQYAA ISEQHQPAEL IPGFSTIEYT 120
  121 ITRAPTMPPV FIFLVDTCMD EEELDALKDS LQMSLSLLPT NALVGLITFG KMIQVHELGA 180
  181 EGCSKSYVFR GTKDLTAKQV QDMLGIGRGA APGPQQQQHL PGQPAGAAAP VPPAHRFLQP 240
  241 IGQCDAALGD LLSELQRDPW PVPQGKRYLR STGAALSIAV GLLECTYPNT GGRIMTFVGG 300
  301 PCSQGPGQVV DDELKHPIRS HHDIHKDNVR FMKKAIKHYD ALALRAATNG HSVDIYSCAL 360
  361 DQTGLLEMKQ LCNSTGGHMV MGDSFNSSLF KQTFQRVFAR DGRNDLKMAF NATLEVKCSR 420
  421 ELKISGGIGS CVSLNVKSPS VSDVEIGMGN TVQWKLCTLN PSSTVAYFFE VVNQHAAPIP 480
  481 QGGRGCIQFI TQYQHPSGQR RIRVTTLARN WADATSNVHH ISAGFDQEAA AVLMARMVVY 540
  541 RAETDEGPDI LRWVDRQLIR LCQKFGEYSK DDPNSFRLSQ NFSLFPQFMY HLRRSQFLQV 600
  601 FNNSPDETTF YRHMLMREDL TQSLIMIQPI LYSYSFNGPP EPVLLDTASI QADRILLMDT 660
  661 FFQILIYHGE TIAQWRALKY QDMPEYENFK QLLQAPVDDA QEILQTRFPM PRYIDTEHGG 720
  721 SQARFLLSKV NPSQTHNNMY AYGQDGGAPV LTDDVSLQLF MEHLKKLAVS TTT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..773] PSI-BLAST 1000.0 No description for 2nupA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle