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Protein Overview: l(3)82Fd-PN, l(3...

General Information:
Name(s) found: l(3)82Fd-PN / FBpp0099569 [FlyBase]
l(3)82Fd-PJ / FBpp0078454 [FlyBase]
l(3)82Fd-PB / FBpp0078453 [FlyBase]
Description(s) found:
Found 49 descriptions.
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  • The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1098665..1176165. It has the cytological map location 82F8-82F10. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cell wall macromolecule catabolic process. 22 alleles are reported. The phenotype of these alleles is annotated with: pigment cell. It has 19 annotated transcripts and 19 annotated polypeptides. [FlyBase]
  • The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1098665..1176165. It has the cytological map location 82F8-82F10. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cell wall macromolecule catabolic process. 22 alleles are reported. The phenotype of these alleles is annotated with: pigment cell. It has 19 annotated transcripts and 19 annotated polypeptides. [FlyBase]
  • The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1098665..1176165. It has the cytological map location 82F8-82F10. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cell wall macromolecule catabolic process. 22 alleles are reported. The phenotype of these alleles is annotated with: pigment cell. It has 19 annotated transcripts and 19 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1270 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIIDSGKYR LRKDWASASI PSLVNIDEHD GDSGDTEGSL NATAPLPPQK PPRRSSLALG  60
   61 LFSSKSDKSQ KRRSSIAVSF LRRDSSKNST KDSYESAVRS EKSDGSGTPT SPEIVYSSEE 120
  121 NIRASSPNDP GKQTFFEDGS QSPRPVLQGL NTSYEGPQND RQRRRRSSLQ TKLDRHRRKK 180
  181 MEYSNQRSLD SGMMCSESHS DLTNDSLAEG SGSFANRSRN GNDDEDDIID PSHGEYFPRE 240
  241 KRHSWWNIFV PDNFKNRSRR ASQDVSSLSR SVDNLAIPVR RSKSRSVDHG LAAPFDLDSL 300
  301 RSKVEQRFES VDKLSRQKSS LPTIPTISYT VGNRDTLTSV AARFDTTPSE LTHLNRLNSS 360
  361 FIYPGQQLLV PDKSAKDDAS SSSTHDADGA SLSGKSSPVE RKLSGDESRE KDILEGLRPG 420
  421 SPKPGHIERV GGSSQQQQAE EEANKSDDPV ITQRFLKINV RHITDGQGVV GGVLLVTPNA 480
  481 VMFDPNVSDP LVIEHGPESY GVIAPMELVV NAAIFHDIAH MRVAGGAGQG LNSASGDAEK 540
  541 PEIYYPKPVL VEEDSKELPE QQSLLGEDGN KRLDAEIGSL EIADDQESLC SSTGRDGDAF 600
  601 PKAFDRERVE DSSMEAKDSA KTDALDDEDK KAGLGLSSTR STLEERRKSL LDHHWAIPSK 660
  661 DRSSEDEGDN ESNVTVDSGA RVQDPHSANS SVSGVPLSQP PVAAAAAAAA VAPASAVVPL 720
  721 PPSGIDLEHL EQLSKQSCYD SGIDIREPVP NVQPIPKKTV YSDADIVLSS DWVPPKTIVP 780
  781 THFSESPPRS TILGQSLDAG TGGAGGVRKK TSSVSFSVDD EAAQQAQAQS AALAVTDKQA 840
  841 DKKNKMLKRL SYPLTWVEGL TGEGGAVPPG GVGSGSLNKS GDTDSAPNTG DSNQSVFSKV 900
  901 FSRRSSIGTF IRPHSSEGTS SSTKLKEAKQ APKLDYRSMV SMDDKPELFI SVDKLIPRPA 960
  961 RACLDPPLYL RLRMGKPIGK AIPLPTSVMS YGKNKLRAEY WFSVPKNRVD ELYRFINTWV1020
 1021 KHLYGELDEE QIKARGFELI QEDTEWTKSG TTKAGMGGGS QDGEEISDLT RESWEVLSMS1080
 1081 TDEYRKTSLF ATGSFDLDFP IPDLIGKTEI LTEEHREKLC SHLPARAEGY SWSLIFSTSQ1140
 1141 HGFALNSLYR KMARLESPVL IVIEDTEHNV FGALTSCSLH VSDHFYGTGE SLLYKFNPSF1200
 1201 KVFHWTGENM YFIKGNMESL SIGAGDGRFG LWLDGDLNQG RSQQCSTYGN EPLAPQEDFV1260
 1261 IKTLECWAFV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] MSA 1.289987 View MSA. No confident structure predictions are available.
    2 View Details [113..279] deduced N/A No confident structure predictions are available.
    3 View Details [280..394] FFAS03 3.31 No description for 2djpA was found.
    4 View Details [395..564] deduced N/A No confident structure predictions are available.
    5 View Details [565..713] deduced N/A No confident structure predictions are available.
    6 View Details [714..930] deduced N/A No confident structure predictions are available.
    7 View Details [931..1104] deduced N/A No confident structure predictions are available.
    8 View Details [1105..1270] MSA 22.146993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle