YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: l(3)82Fd-PD

General Information:
Name(s) found: l(3)82Fd-PD / FBpp0078451 [FlyBase]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • The gene l(3)82Fd is referred to in FlyBase by the symbol Dmel\l(3)82Fd (CG32464, FBgn0013576). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:1098665..1176165. It has the cytological map location 82F8-82F10. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: cell wall macromolecule catabolic process. 22 alleles are reported. The phenotype of these alleles is annotated with: pigment cell. It has 19 annotated transcripts and 19 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHAGAPIST SASNIATVLE DGENQQLPPL TGSGPSRQRS LRDRLKDGIT GSFSWQSKSR  60
   61 SVDHGLAAPF DLDSLRSKVE QRFESVDKLS RQKSSLPTIP TISYTVGNRD TLTSVAARFD 120
  121 TTPSELTHLN RLNSSFIYPG QQLLVPDKSA KDDASSSSTH DADGASLSGK SSPVERKLSG 180
  181 DESREKDILE GLRPGSPKPG HIERVGGSSQ QQQAEEEANK SDDPVITQRF LKINVRHITD 240
  241 GQGVVGGVLL VTPNAVMFDP NVSDPLVIEH GPESYGVIAP MELVVNAAIF HDIAHMRVAG 300
  301 GAGQGLNSAS GDAEKPEIYY PKPVLVEEDS KELPEQQSLL GEDGNKRLDA EIGSLEIADD 360
  361 QESLCSSTGR DGDAFPKAFD RERVEDSSME AKDSAKTDAL DDEDKKAGLG LSSTRSTLEE 420
  421 RRKSLLDHHW AIPSKDRSSE DEGDNESNVT VDSGARVQDP HSANSSVSGV PLSQPPVAAA 480
  481 AAAAAVAPAS AVVPLPPSGI DLEHLEQLSK QSCYDSGIDI REPVPNVQPI PKKTVYSDAD 540
  541 IVLSSDWVPP KTIVPTHFSE SPPRSTILGQ SLDAGTGGAG GVRKKTSSVS FSVDDEAAQQ 600
  601 AQAQSAALAV TDKQADKKNK MLKRLSYPLT WVEGLTGEGG AVPPGGVGSG SLNKSGDTDS 660
  661 APNTGDSNQS VFSKVFSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] deduced N/A No confident structure predictions are available.
    2 View Details [68..228] PSI-BLAST 5.522879 No description for 2djpA was found.
    3 View Details [229..311] deduced N/A No confident structure predictions are available.
    4 View Details [312..539] MSA 1.22899 View MSA. No confident structure predictions are available.
    5 View Details [540..678] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle