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Protein Overview: rpk-PA

General Information:
Name(s) found: rpk-PA / FBpp0078499 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • The gene ripped pocket is referred to in FlyBase by the symbol Dmel\rpk (CG1058, FBgn0022981). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:471653..474606. It has the cytological map location 82C5. Based on sequence similarity, it is predicted to have molecular function</span>: amiloride-sensitive sodium channel activity; sodium channel activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: sodium ion transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 562 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: sodium ion transport [IEA]
    Molecular Function: sodium channel activity [ISS][NAS]
    amiloride-sensitive sodium channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTISDSELDS SKGIDLTFRR RRKAGSVACE GFITTYHEYC RNTSIHGVQY LGEQERPFRE  60
   61 RIFWLFVFLI SIYGCSTLIQ SAYTKWTETP VIVSFAEKST PVWNIPFPAV TVCSETKRVL 120
  121 KQKGKETTYA DLYSQFSEDM RASRVFRPEN VSALEMEEFR TLLHVCNTQI IEEDIPLIAG 180
  181 DDLDYFDVLQ RMLPQFDRYF FYCRWLSRFG ECETFFRKTL TEEGICYTFN GLRATEIYRD 240
  241 DTYQYQHSGE PLEMENISSQ HTAWTLETGY ALDSDVETFP ARVLSAGARS GIFLALQSFK 300
  301 QEVDYACRGP VQGFKVLLHA PDDVPQVSKQ FVRIPMGKEV LIAVKPNMIT MSSGIAEYHP 360
  361 VRRQCFLSHE RSLRFFKVYT ESNCQLECLA NFTLTKCGCV KFSMPRNVDM PVCGEDKIHC 420
  421 YDRAERELLV REFKRVKALN AGRENSRSVE SACNCMPACT SLVYNTEISQ ANFDLEEMLV 480
  481 AEGDTEFLKE YPGSQMSRLS IYFKQSQFIT SKRSELYGMT EFLANCGGIF GLFMGFSILS 540
  541 LVEMIYHFTL RLFTNLKRLV KG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..562] PSI-BLAST 91.69897 No description for 2qtsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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