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Protein Overview: FBpp0310951, Edg...

General Information:
Name(s) found: FBpp0310951 [FlyBase]
Edg78E-PA / FBpp0078062 [FlyBase]
Description(s) found:
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  • gi|7296415|gb|AAF51702.1| Ecdysone-dependent gene 78E [Drosophila melanogaster] [NCBI NR]
  • pir||A49773 ecdysone-dependent cuticle protein EDG-78 - fruit fly (Drosophila melanogaster) [NCBI NR]
  • gi|17737713|ref|NP_524198.1| Ecdysone-dependent gene 78E [Drosophila melanogaster] [NCBI NR]
  • gi|157323|gb|AAA28500.1| cuticle protein [NCBI NR]
  • gi|157321|gb|AAA28499.1| cuticle protein [Drosophila melanogaster] [NCBI NR]
  • gi|117639|sp|P27779.1|CUP7_DROME RecName: Full=Pupal cuticle protein Edg-78E; Flags: Precursor [NCBI NR]
  • Pupal cuticle protein Edg-78E OS=Drosophila melanogaster GN=Edg78E PE=1 SV=1 [Swiss-Prot]
  • type=protein; loc=3L:complement(21290385..21290741,21290816..21290827); ID=FBpp0310951; name=Edg78E-PB; parent=FBgn0000551,FBtr0344634; dbxref=FlyBase:FBpp0310951,FlyBase_Annotation_IDs:CG7673-PB; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ecdysone-dependent gene 78E is referred to in FlyBase by the symbol Dmel\Edg78E (CG7673, FBgn0000551). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:21289863..21290903. It has the cytological map location 78C6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG7673-PA translation from_gene[CG7673 Edg78E FBgn0000551] seq_release:3 mol_weight=13347 cds_boundaries:(3L:21,214,564..21,215,003[-]) aa_length:122 transcript_info:[CG7673-RA seq_release:3] gene_info:[gene symbol:Edg78E FBgn0000551 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (P27779) Pupal cuticle protein Edg-78E precursor [DrosMelano7227.FASTAC.txt]
  • (AE003594) Edg78E gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG7673-PA [Drosophila melanogaster]gi|17737713|ref|NP_524198.1| CG7673-PA [Drosophila melanogaster]gi|477634|pir||A49773 ecdysone-dependent cuticle protein EDG-78 - fruit fly (Drosophila melanogaster)gi|117639|sp|P27779|CUP7_DROME Pupal cuticle protei [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(21290385..21290741,21290816..21290827); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702; [fly-100309-contam.fasta]
  • cuticle protein [nr-271106-contam.fasta]
  • Pupal cuticle protein Edg-78E precursor [nr-271106-contam.fasta]
  • Ecdysone-dependent gene 78E CG7673-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG7673-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(21290385..21290741,21290816..21290827); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(21290385..21290741,21290816..21290827); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:complement(21290385..21290741,21290816..21290827); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702,FlyMine:FBpp0078062,modMine:FBpp0078062; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702,FlyMine:FBpp0078062,modMine:FBpp0078062; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0310951; name=Edg78E-PB; parent=FBgn0000551,FBtr0344634; dbxref=GB_protein:AHN58165,REFSEQ:NP_001287140,FlyBase:FBpp0310951,FlyBase_Annotation_IDs:CG7673-PB; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0310951; name=Edg78E-PB; parent=FBgn0000551,FBtr0344634; dbxref=GB_protein:AHN58165,REFSEQ:NP_001287140,FlyBase:FBpp0310951,FlyBase_Annotation_IDs:CG7673-PB; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702,FlyMine:FBpp0078062,modMine:FBpp0078062; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P27779, Ecdysone-dependent gene 78E, isoform B OS=Drosophila melanogaster GN=Edg78E PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0078062 type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702,FlyMine:FBpp0078062,modMine:FBpp0078062; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0310951 type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0310951; name=Edg78E-PB; parent=FBgn0000551,FBtr0344634; dbxref=GB_protein:AHN58165,REFSEQ:NP_001287140,FlyBase:FBpp0310951,FlyBase_Annotation_IDs:CG7673-PB; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0078062; name=Edg78E-PA; parent=FBgn0000551,FBtr0078408; dbxref=FlyBase_Annotation_IDs:CG7673-PA,FlyBase:FBpp0078062,GB_protein:AAF51702.1,REFSEQ:NP_524198,GB_protein:AAF51702,UniProt/Swiss-Prot:P27779,FlyMine:FBpp0078062,modMine:FBpp0078062; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(21297716..21297727,21297285..21297641)); ID=FBpp0310951; name=Edg78E-PB; parent=FBgn0000551,FBtr0344634; dbxref=GB_protein:AHN58165,REFSEQ:NP_001287140,FlyBase:FBpp0310951,FlyBase_Annotation_IDs:CG7673-PB,UniProt/Swiss-Prot:P27779; MD5=644a971d7bef3008a551ccbeccc84374; length=122; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 122 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of pupal chitin-based cuticle [NAS][TAS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKYLFCLAL IGCACADNIN KDAQIRSFQN DATDAEGNYQ YAYETSNGIQ IQEAGNANGA  60
   61 RGAVAYVSPE GEHISLTYTA DEEGYHPVGD HLPTPPPVPA YVLRALEYIR THPPAPAQKE 120
  121 QQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] Pfam 26.853872 No description for PF00379.14 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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