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Protein Overview: CG5498-PB

General Information:
Name(s) found: CG5498-PB / FBpp0077896 [FlyBase]
Description(s) found:
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  • gi|5052586|gb|AAD38623.1|AF145648_1 BcDNA.GH08385 [Drosophila melanogaster] [NCBI NR]
  • gi|28574808|ref|NP_730525.2| CG5498 [Drosophila melanogaster] [NCBI NR]
  • gi|28380609|gb|AAN12125.2| CG5498 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5498 (CG5498, FBgn0027565). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:20375505..20377194. It has the cytological map location 77B9. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein transport. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5498-PB translation from_gene[CG5498 BcDNA:GH08385 FBgn0027565] seq_release:3 mol_weight=51047 cds_boundaries:(3L:20,301,036..20,302,561[-]) aa_length:448 transcript_info:[CG5498-RB seq_release:3] gene_info:[gene symbol:BcDNA:GH08385 FBgn0027565 gen [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9Y124) CG5498 protein (CG5498-PB) [DrosMelano7227.FASTAC.txt]
  • CG5498-PB [Drosophila melanogaster]gi|28574808|ref|NP_730525.2| CG5498-PB [Drosophila melanogaster]gi|5052586|gb|AAD38623.1| BcDNA.GH08385 [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(20375595..20376040,20376110..20376319,20376381..20376600,20376653..20377123); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2 [fly-100309-contam.fasta]
  • BcDNA.GH08385 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5498-PB [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(20375595..20376040,20376110..20376319,20376381..20376600,20376653..20377123); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(20375595..20376040,20376110..20376319,20376381..20376600,20376653..20377123); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • BcDNA.GH08385 OS=Drosophila melanogaster GN=BcDNA.GH08385 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(20375595..20376040,20376110..20376319,20376381..20376600,20376653..20377123); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125,FlyMine:FBpp0077896,modMine:FBpp0077896; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • BcDNA.GH08385 OS=Drosophila melanogaster GN=BcDNA.GH08385 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:complement(join(20383553..20384023,20383281..20383500,20383010..20383219,20382495..20382940)); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125,FlyMine:FBpp0077896,modMine:FBpp0077896; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(20383553..20384023,20383281..20383500,20383010..20383219,20382495..20382940)); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125,FlyMine:FBpp0077896,modMine:FBpp0077896; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0077896 type=protein; loc=3L:complement(join(20383553..20384023,20383281..20383500,20383010..20383219,20382495..20382940)); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125,FlyMine:FBpp0077896,modMine:FBpp0077896; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(20383553..20384023,20383281..20383500,20383010..20383219,20382495..20382940)); ID=FBpp0077896; name=CG5498-PB; parent=FBgn0027565,FBtr0078238; dbxref=FlyBase:FBpp0077896,FlyBase_Annotation_IDs:CG5498-PB,GB_protein:AAN12125.2,REFSEQ:NP_730525,GB_protein:AAN12125,UniProt/TrEMBL:Q9Y124,FlyMine:FBpp0077896,modMine:FBpp0077896; MD5=790a79d8122856bc3c70837bd7489c70; length=448; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLGSGDRVN ETDHFSFPAS WQDNGRMQVQ FAMFRSRHLD AEGYDAKMNF WMDLIAKYLK  60
   61 FSGRPIFSLR DLQLLFMRGD QLPACLDTVI SEMQQRKQIR SRSEFEYDPA NSWGGWLVNS 120
  121 LVKRPLSWSW SKIKHSVVTE DLEASALIEW IHLDALNNTC DLIAEKVLSE NTGKLLHFNA 180
  181 LKTLCKTHGV PTYSDKDLCA CLLALNVRQI LGLEFKVEKG IRQIHLIKIP KKPGDDLNIS 240
  241 QEDQAVHNLQ NTQAQLLKQL EDLEEEIKVN DDKVRQYMKE NKRQMAKTYL RKRHLLEKNH 300
  301 ERRSLALHNI ESLLSSVDEA QNSGVVLDAY KIGSNTLKKV LSNSGLKYDN VDEVLADVRD 360
  361 TLDQHREVQD IMSNSVVENA SQEDDQLEQE LRELAGESAP ATFSPHINNN LRAEVVITDE 420
  421 EMIAMLQDLE VEDGTVSQSS VKSVKTAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle