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Protein Overview: Chmp1-PA, FBpp03...

General Information:
Name(s) found: FBpp0311533 [FlyBase]
Chmp1-PA / FBpp0074859 [FlyBase]
Description(s) found:
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  • gi|28574861|ref|NP_649051.3| Chmp1 [Drosophila melanogaster] [NCBI NR]
  • gi|28380485|gb|AAF49241.2| Chmp1 [Drosophila melanogaster] [NCBI NR]
  • gi|16768254|gb|AAL28346.1| GH26351p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3L:complement(18676319..18676908,18676980..18677001); ID=FBpp0311533; name=Chmp1-PB; parent=FBgn0036805,FBtr0345383; dbxref=FlyBase:FBpp0311533,FlyBase_Annotation_IDs:CG4108-PB; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r5.56; species=Dmel; [FlyBase]
  • The gene Chmp1 is referred to in FlyBase by the symbol Dmel\Chmp1 (CG4108, FBgn0036805). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:18676243..18677159. It has the cytological map location 75D6. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein transport. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4108-PA translation from_gene[CG4108 Chmp1 FBgn0036805] seq_release:3 mol_weight=22329 cds_boundaries:(3L:18,632,101..18,632,780[-]) aa_length:203 transcript_info:[CG4108-RA seq_release:3] gene_info:[gene symbol:Chmp1 FBgn0036805 gene_boundaries:(3L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q95SH2) GH26351p (CG4108-PA) [DrosMelano7227.FASTAC.txt]
  • CG4108-PA [Drosophila melanogaster]gi|16768254|gb|AAL28346.1| GH26351p [Drosophila melanogaster]gi|28574861|ref|NP_649051.3| CG4108-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(18676319..18676908,18676980..18677001); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241; [fly-100309-contam.fasta]
  • Chmp1 CG4108-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH26351p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG4108-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(18676319..18676908,18676980..18677001); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(18676319..18676908,18676980..18677001); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Chmp1 OS=Drosophila melanogaster GN=Chmp1 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(18676319..18676908,18676980..18677001); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241,FlyMine:FBpp0074859,modMine:FBpp0074859; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241,FlyMine:FBpp0074859,modMine:FBpp0074859; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0311533; name=Chmp1-PB; parent=FBgn0036805,FBtr0345383; dbxref=FlyBase:FBpp0311533,FlyBase_Annotation_IDs:CG4108-PB,GB_protein:AHN58133,REFSEQ:NP_001287108; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241,FlyMine:FBpp0074859,modMine:FBpp0074859; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0311533; name=Chmp1-PB; parent=FBgn0036805,FBtr0345383; dbxref=FlyBase:FBpp0311533,FlyBase_Annotation_IDs:CG4108-PB,GB_protein:AHN58133,REFSEQ:NP_001287108; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Charged multivesicular body protein 1, isoform A OS=Drosophila melanogaster GN=Chmp1 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0074859 type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241,FlyMine:FBpp0074859,modMine:FBpp0074859; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311533 type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0311533; name=Chmp1-PB; parent=FBgn0036805,FBtr0345383; dbxref=FlyBase:FBpp0311533,FlyBase_Annotation_IDs:CG4108-PB,GB_protein:AHN58133,REFSEQ:NP_001287108; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0074859; name=Chmp1-PA; parent=FBgn0036805,FBtr0075092; dbxref=FlyBase:FBpp0074859,FlyBase_Annotation_IDs:CG4108-PA,GB_protein:AAF49241.2,REFSEQ:NP_649051,GB_protein:AAF49241,UniProt/TrEMBL:Q95SH2,FlyMine:FBpp0074859,modMine:FBpp0074859; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:complement(join(18683880..18683901,18683219..18683808)); ID=FBpp0311533; name=Chmp1-PB; parent=FBgn0036805,FBtr0345383; dbxref=FlyBase:FBpp0311533,FlyBase_Annotation_IDs:CG4108-PB,GB_protein:AHN58133,REFSEQ:NP_001287108,UniProt/TrEMBL:Q95SH2; MD5=0957ff197b5538234021e8c69fe9af67; length=203; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 203 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTSSMEKHL FNLKFAVKEL ERNSKKCEKE EKLEKAKAKK AIQKGNMDVA RIHAENAIRQ  60
   61 KNQAVNYLRM SARVDAVASR VQSALTTRKV TGSMAGVVKA MDAAMKGMNL EKISSLMEKF 120
  121 ESQFEDLDVQ SSVMEGTMSD TVTTSVPQGD VDNLLQQVAD EAGLELNMEL PSGVQSQSVG 180
  181 ASTAVSQEQD ELTQRLARLR QAE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle