YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG5161-PA

General Information:
Name(s) found: CG5161-PA / FBpp0075246 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|24665053|ref|NP_648841.1| CG5161 [Drosophila melanogaster] [NCBI NR]
  • gi|23093372|gb|AAF49531.2| CG5161 [Drosophila melanogaster] [NCBI NR]
  • gi|17946286|gb|AAL49183.1| RE62842p [Drosophila melanogaster] [NCBI NR]
  • Probable trafficking protein particle complex subunit 2 OS=Drosophila melanogaster GN=Trs20 PE=2 SV=2 [Swiss-Prot]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5161 (CG5161, FBgn0036573). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:16124092..16124703. It has the cytological map location 72D9. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: dsRNA transport. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5161-PA translation from_gene[CG5161 CG5161 FBgn0036573] seq_release:3 mol_weight=16646 cds_boundaries:(3L:16,079,988..16,080,461[-]) aa_length:139 transcript_info:[CG5161-RA seq_release:3] gene_info:[gene symbol:CG5161 FBgn0036573 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VUZ1) CG5161 protein (RE62842p) [DrosMelano7227.FASTAC.txt]
  • CG5161-PA [Drosophila melanogaster]gi|17946286|gb|AAL49183.1| RE62842p [Drosophila melanogaster]gi|24665053|ref|NP_648841.1| CG5161-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(16124206..16124538,16124596..16124682); ID=FBpp0075246; name=CG5161-PA; parent=FBgn0036573,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531; [fly-100309-contam.fasta]
  • RE62842p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5161-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(16124206..16124538,16124596..16124682); ID=FBpp0075246; name=CG5161-PA; parent=FBgn0036573,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(16124206..16124538,16124596..16124682); ID=FBpp0075246; name=CG5161-PA; parent=FBgn0036573,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5161 OS=Drosophila melanogaster GN=CG5161 PE=1 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(16124206..16124538,16124596..16124682); ID=FBpp0075246; name=l(3)72Dh-PA; parent=FBgn0263604,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531,FlyMine:FBpp0075246,modMine:FBpp0075246; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Probable trafficking protein particle complex subunit 2 OS=Drosophila melanogaster GN=CG5161 PE=2 SV=2 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:complement(join(16131496..16131582,16131106..16131438)); ID=FBpp0075246; name=Trs20-PA; parent=FBgn0266724,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531,FlyMine:FBpp0075246,modMine:FBpp0075246; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(16131496..16131582,16131106..16131438)); ID=FBpp0075246; name=Trs20-PA; parent=FBgn0266724,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531,FlyMine:FBpp0075246,modMine:FBpp0075246; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0075246 type=protein; loc=3L:complement(join(16131496..16131582,16131106..16131438)); ID=FBpp0075246; name=Trs20-PA; parent=FBgn0266724,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531,FlyMine:FBpp0075246,modMine:FBpp0075246; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(16131496..16131582,16131106..16131438)); ID=FBpp0075246; name=Trs20-PA; parent=FBgn0266724,FBtr0075491; dbxref=FlyBase:FBpp0075246,FlyBase_Annotation_IDs:CG5161-PA,GB_protein:AAF49531.2,REFSEQ:NP_648841,GB_protein:AAF49531,UniProt/Swiss-Prot:Q9VUZ1,FlyMine:FBpp0075246,modMine:FBpp0075246; MD5=1201bd912a15938953194631e179f2c5; length=139; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 139 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: ER to Golgi vesicle-mediated transport [IEA]
    dsRNA transport [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTYYFVIVG QNDNPIYEKE FSTVNKELRK EDHRHLTQFI AHAALDLVDE HKWKTANMQL  60
   61 KSIDRFNQWF VSAFITASQI RFIIVHDNKN DEGIKNFFNE MYDTYIKNSM NAFYRINTPI 120
  121 KSPMFEKKSE IFGRKYLLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle