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Protein Overview: CG7339-PA, FBpp0...

General Information:
Name(s) found: FBpp0303920 [FlyBase]
CG7339-PA / FBpp0075838 [FlyBase]
Description(s) found:
Found 28 descriptions.
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  • type=protein; loc=3L:join(11641941..11642051,11642109..11642591,11642651..11642779); ID=FBpp0303920; name=CG7339-PB; parent=FBgn0036188,FBtr0331530; dbxref=FlyBase:FBpp0303920,FlyBase_Annotation_IDs:CG7339-PB,REFSEQ:NP_001261720,GB_protein:AGB94414; MD5=ef9763bb6659ee942822f1aafc866210; length=240; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG7339 (CG7339, FBgn0036188). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:11641884..11642967. It has the cytological map location 68D1. Based on sequence similarity, it is predicted to have molecular function</span>: DNA-directed RNA polymerase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: transcription from RNA polymerase III promoter. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: DNA-directed RNA polymerase III complex [ISS]
    Biological Process: transcription from RNA polymerase III promoter [ISS]
    transcription [IEA]
    Molecular Function: DNA-directed RNA polymerase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVLAELKDN VRIAPDQFHL KLVDAVRDEI DRKLANKVLL NVGLCIALKD IVSLKDSIIL  60
   61 PGDGASHTEV LFRYVVFRPM VGTVITGKIR NCSREGVHVT LGFFDDILIP HAALQHPSRF 120
  121 DEAEQAWVWE YPLEDGAKHD LFMDVGEPIK FRVSREIFEE TSPIGPPKTE AQTQQGASTS 180
  181 AAVASATSQE VKTPYRIIGA INESGLGVLS WWDQQGKDDE QDDEEDEEYD DEDGEGACEE 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 43.30103 No description for 2ckzB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle