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Protein Overview: Doc1-PA

General Information:
Name(s) found: Doc1-PA / FBpp0076249 [FlyBase]
Description(s) found:
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  • gi|94400601|gb|ABF17917.1| FI01016p [Drosophila melanogaster] [NCBI NR]
  • gi|6513851|dbj|BAA87864.1| Tbx6 protein [Drosophila melanogaster] [NCBI NR]
  • gi|23093850|gb|AAF50328.2| Dorsocross1 [Drosophila melanogaster] [NCBI NR]
  • gi|21355537|ref|NP_648283.1| Dorsocross1 [Drosophila melanogaster] [NCBI NR]
  • The gene Dorsocross1 is referred to in FlyBase by the symbol Dmel\Doc1 (CG5133, FBgn0028789). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:9034477..9038144. It has the cytological map location 66F2-66F3. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: embryonic development via the syncytial blastoderm; cardiac cell differentiation. 8 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5133-PA translation from_gene[CG5133 Doc1 FBgn0028789] seq_release:3 mol_weight=43248 cds_boundaries:(3L:9,000,250..9,003,564[+]) aa_length:391 transcript_info:[CG5133-RA seq_release:3] gene_info:[gene symbol:Doc1 FBgn0028789 gene_boundaries:(3L:9,0 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9U8L5) DORSOCROSS protein (TBX6 protein) (CG5133 protein) [DrosMelano7227.FASTAC.txt]
  • (AAF50328) CG5133-PA [DrosMelano7227.FASTAC.txt]
  • CG5133-PA [Drosophila melanogaster]gi|6513851|dbj|BAA87864.1| Tbx6 protein [Drosophila melanogaster]gi|21355537|ref|NP_648283.1| CG5133-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(9034640..9034730,9035133..9035298,9036488..9036755,9036824..9036961,9037445..9037957); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328. [fly-100309-contam.fasta]
  • FI01016p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Tbx6 protein [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5133-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Dorsocross1 CG5133-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(9034640..9034730,9035133..9035298,9036488..9036755,9036824..9036961,9037445..9037957); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(9034640..9034730,9035133..9035298,9036488..9036755,9036824..9036961,9037445..9037957); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Dorsocross1 OS=Drosophila melanogaster GN=Doc1 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(9034640..9034730,9035133..9035298,9036488..9036755,9036824..9036961,9037445..9037957); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328,FlyMine:FBpp0076249,modMine:FBpp0076249; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(9041540..9041630,9042033..9042198,9043388..9043655,9043724..9043861,9044345..9044857); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328,FlyMine:FBpp0076249,modMine:FBpp0076249; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(9041540..9041630,9042033..9042198,9043388..9043655,9043724..9043861,9044345..9044857); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328,FlyMine:FBpp0076249,modMine:FBpp0076249; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Dorsocross1, isoform A OS=Drosophila melanogaster GN=Doc1 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0076249 type=protein; loc=3L:join(9041540..9041630,9042033..9042198,9043388..9043655,9043724..9043861,9044345..9044857); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328,FlyMine:FBpp0076249,modMine:FBpp0076249; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(9041540..9041630,9042033..9042198,9043388..9043655,9043724..9043861,9044345..9044857); ID=FBpp0076249; name=Doc1-PA; parent=FBgn0028789,FBtr0076522; dbxref=FlyBase:FBpp0076249,FlyBase_Annotation_IDs:CG5133-PA,GB_protein:AAF50328.2,REFSEQ:NP_648283,GB_protein:AAF50328,UniProt/TrEMBL:Q9U8L5,FlyMine:FBpp0076249,modMine:FBpp0076249; MD5=5651715e02e76dad28a5810c35043b61; length=391; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 391 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: heart development [TAS]
    embryonic development via the syncytial blastoderm [IMP]
    cardiac cell differentiation [IMP]
    regulation of transcription, DNA-dependent [IEA][ISS]
    regulation of transcription [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSMQELMDM RMQQQLAHEI YRQQIMQRIP DPFPSMLPFN MPHQQPHMML PSRPTLPGVE  60
   61 AKLENNDLWQ QFHKIGTEMI ITKSGRRMFP SMRVSLSGLE EEASYCVLLE MVPIGDCRYK 120
  121 FSGSQWVPAG GAEPQSPQRM YLHPDSPATG AHWQSQALLF NKVKLTNNTL DSSGHIVLAS 180
  181 MHKYQPRLHI IRSSELTQLP WAPQQAFVFP ETEFVAVTAY QNDRITKLKI DNNPFAKGFR 240
  241 ESGQSRCKRK LNSSGNSTLE SEDDGSSVSS CDSPQAKRQR QDFEQDSTGS VSPAYYGATH 300
  301 PVANPMSPYL RHHLSYGPSG AAGLPPSIAA AYFGGVPPQI LPMPPATYAP TVAPVSPVAS 360
  361 QPVGSSTPTT SPRPSTSTKR NSFSISAILA Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle