YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: mRpL50-PA

General Information:
Name(s) found: mRpL50-PA / FBpp0076601 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7295272|gb|AAF50594.1| mitochondrial ribosomal protein L50 [Drosophila melanogaster] [NCBI NR]
  • gi|6457571|gb|AAF09579.1|AF199369_1 unknown [Drosophila melanogaster] [NCBI NR]
  • gi|21357011|ref|NP_648092.1| mitochondrial ribosomal protein L50 [Drosophila melanogaster] [NCBI NR]
  • gi|21064325|gb|AAM29392.1| RE06140p [Drosophila melanogaster] [NCBI NR]
  • gi|20151487|gb|AAM11103.1| GM06185p [Drosophila melanogaster] [NCBI NR]
  • The gene mitochondrial ribosomal protein L50 is referred to in FlyBase by the symbol Dmel\mRpL50 (CG8612, FBgn0028648). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:7236174..7237032. It has the cytological map location 65E9. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG8612-PA translation from_gene[CG8612 mRpL50 FBgn0028648] seq_release:3 mol_weight=20927 cds_boundaries:(3L:7,202,737..7,203,418[-]) aa_length:189 transcript_info:[CG8612-RA seq_release:3] gene_info:[gene symbol:mRpL50 FBgn0028648 gene_boundaries:(3L [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V3E3) ANON-65EB protein (GM06185p) (RE06140p) [DrosMelano7227.FASTAC.txt]
  • (AE003559) CG8612 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG8612-PA [Drosophila melanogaster]gi|21064325|gb|AAM29392.1| RE06140p [Drosophila melanogaster]gi|20151487|gb|AAM11103.1| GM06185p [Drosophila melanogaster]gi|6457571|gb|AAF09579.1| unknown [Drosophila melanogaster]gi|21357011|ref|NP_648092.1| CG8612 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:complement(7236305..7236734,7236794..7236903,7236960..7236989); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_prot [fly-100309-contam.fasta]
  • GM06185p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG8612-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • unknown [Drosophila melanogaster] [nr-271106-contam.fasta]
  • RE06140p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • mitochondrial ribosomal protein L50 CG8612-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:complement(7236305..7236734,7236794..7236903,7236960..7236989); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:complement(7236305..7236734,7236794..7236903,7236960..7236989); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GM06185p OS=Drosophila melanogaster GN=mRpL50 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:complement(7236305..7236734,7236794..7236903,7236960..7236989); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594,FlyMine:FBpp0076601,modMine:FBpp0076601; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • GM06185p OS=Drosophila melanogaster GN=mRpL50 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:complement(join(7243860..7243889,7243694..7243803,7243205..7243634)); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594,FlyMine:FBpp0076601,modMine:FBpp0076601; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:complement(join(7243860..7243889,7243694..7243803,7243205..7243634)); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594,FlyMine:FBpp0076601,modMine:FBpp0076601; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0076601 type=protein; loc=3L:complement(join(7243860..7243889,7243694..7243803,7243205..7243634)); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594,FlyMine:FBpp0076601,modMine:FBpp0076601; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:complement(join(7243860..7243889,7243694..7243803,7243205..7243634)); ID=FBpp0076601; name=mRpL50-PA; parent=FBgn0028648,FBtr0076891; dbxref=GB_protein:AAF50594.1,FlyBase:FBpp0076601,FlyBase_Annotation_IDs:CG8612-PA,REFSEQ:NP_648092,GB_protein:AAF50594,UniProt/TrEMBL:Q9V3E3,FlyMine:FBpp0076601,modMine:FBpp0076601; MD5=72360773f533f13e94f4b3bdb556105c; length=189; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 189 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial large ribosomal subunit [ISS]
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAILRKTLI LAGSLHRSFA SAAKAAKAKP VKTSTISAVG ESIAAKGFLR PHKPYSPPAD  60
   61 AAERIRTVAA SLQLKSDQLG NLSEKFEFLN ACFQELQHGV PNSQVHELRT VSDVIAFYQT 120
  121 AVDTTVPFDA LKRIELPENL HIQYEYVRFH PETDTKFDGK TAFPKSSTLV TGLKYRGKYE 180
  181 GHEAKRSWP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle