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Protein Overview: Lcp65Aa-PA

General Information:
Name(s) found: Lcp65Aa-PA / FBpp0076703 [FlyBase]
Description(s) found:
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  • gi|7295368|gb|AAF50686.1| Lcp65Aa [Drosophila melanogaster] [NCBI NR]
  • gi|1857600|gb|AAB88067.1| cuticle protein LCP65Aa [Drosophila melanogaster] [NCBI NR]
  • gi|17137418|ref|NP_477280.1| Lcp65Aa [Drosophila melanogaster] [NCBI NR]
  • The gene Lcp65Aa is referred to in FlyBase by the symbol Dmel\Lcp65Aa (CG7287, FBgn0020645). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:6144404..6144741. It has the cytological map location 65A6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle; structural constituent of chitin-based larval cuticle. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG7287-PA translation from_gene[CG7287 Lcp65Aa FBgn0020645] seq_release:3 mol_weight=10760 cds_boundaries:(3L:6,110,862..6,111,167[+]) aa_length:102 transcript_info:[CG7287-RA seq_release:3] gene_info:[gene symbol:Lcp65Aa FBgn0020645 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (P91940) LCP65AA protein [DrosMelano7227.FASTAC.txt]
  • (AE003563) Lcp65Aa gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG7287-PA [Drosophila melanogaster]gi|17137418|ref|NP_477280.1| CG7287-PA [Drosophila melanogaster]gi|1857600|gb|AAB88067.1| cuticle protein LCP65Aa [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:6144433..6144741; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686; MD5=0ad257dd1c04d67758182fd529f [fly-100309-contam.fasta]
  • Lcp65Aa CG7287-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • cuticle protein LCP65Aa [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG7287-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:6144433..6144741; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:6144433..6144741; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Cuticle protein LCP65Aa OS=Drosophila melanogaster GN=Lcp65Aa PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:6144433..6144741; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686,FlyMine:FBpp0076703,modMine:FBpp0076703; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:6151333..6151641; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686,FlyMine:FBpp0076703,modMine:FBpp0076703; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:6151333..6151641; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686,FlyMine:FBpp0076703,modMine:FBpp0076703; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0076703 type=protein; loc=3L:6151333..6151641; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686,FlyMine:FBpp0076703,modMine:FBpp0076703; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:6151333..6151641; ID=FBpp0076703; name=Lcp65Aa-PA; parent=FBgn0020645,FBtr0076995; dbxref=FlyBase:FBpp0076703,FlyBase_Annotation_IDs:CG7287-PA,GB_protein:AAF50686.1,REFSEQ:NP_477280,GB_protein:AAF50686,UniProt/TrEMBL:P91940,FlyMine:FBpp0076703,modMine:FBpp0076703; MD5=0ad257dd1c04d67758182fd529f667c6; length=102; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 102 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of chitin-based larval cuticle [ISS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSILVLACL LSALCLAAAA PDAEIVDLVS DVNADSYSYK FETSDGTKQE QHGSLKSLGP  60
   61 EEDALQVAGS FSFVGDDGQT HAISYVADEN GFQPQGEDIP HL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] Pfam 28.0 No description for PF00379.14 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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