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Protein Overview: Lcp65Ad-PA, FBpp...

General Information:
Name(s) found: FBpp0305758 [FlyBase]
Lcp65Ad-PA / FBpp0076699 [FlyBase]
Description(s) found:
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  • gi|7295370|gb|AAF50688.1| Lcp65Ad [Drosophila melanogaster] [NCBI NR]
  • gi|1857495|gb|AAB88063.1| cuticle protein LCP65Ad [Drosophila melanogaster] [NCBI NR]
  • gi|17137414|ref|NP_477278.1| Lcp65Ad [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3L:join(6136569..6136699,6136791..6136986); ID=FBpp0305758; name=Lcp65Ad-PB; parent=FBgn0020641,FBtr0333581; dbxref=REFSEQ:NP_001261466,GB_protein:AGB94161,FlyBase:FBpp0305758,FlyBase_Annotation_IDs:CG6955-PB; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r5.56; species=Dmel; [FlyBase]
  • The gene Lcp65Ad is referred to in FlyBase by the symbol Dmel\Lcp65Ad (CG6955, FBgn0020641). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:6136507..6137109. It has the cytological map location 65A6. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of chitin-based cuticle; structural constituent of chitin-based larval cuticle. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG6955-PA translation from_gene[CG6955 Lcp65Ad FBgn0020641] seq_release:3 mol_weight=11748 cds_boundaries:(3L:6,102,777..6,103,191[+]) aa_length:108 transcript_info:[CG6955-RA seq_release:3] gene_info:[gene symbol:Lcp65Ad FBgn0020641 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (P91939) LCP65AD protein [DrosMelano7227.FASTAC.txt]
  • (AE003563) Lcp65Ad gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG6955-PA [Drosophila melanogaster]gi|17137414|ref|NP_477278.1| CG6955-PA [Drosophila melanogaster]gi|1857495|gb|AAB88063.1| cuticle protein LCP65Ad [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(6136569..6136699,6136791..6136986); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688; MD5=b6e8 [fly-100309-contam.fasta]
  • Lcp65Ad CG6955-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • cuticle protein LCP65Ad [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG6955-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(6136569..6136699,6136791..6136986); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(6136569..6136699,6136791..6136986); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Cuticle protein LCP65Ad OS=Drosophila melanogaster GN=Lcp65Ad PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(6136569..6136699,6136791..6136986); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688,FlyMine:FBpp0076699,modMine:FBpp0076699; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(6136569..6136699,6136791..6136986); ID=FBpp0305758; name=Lcp65Ad-PB; parent=FBgn0020641,FBtr0333581; dbxref=FlyBase:FBpp0305758,FlyBase_Annotation_IDs:CG6955-PB; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688,FlyMine:FBpp0076699,modMine:FBpp0076699; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0305758; name=Lcp65Ad-PB; parent=FBgn0020641,FBtr0333581; dbxref=REFSEQ:NP_001261466,GB_protein:AGB94161,FlyBase:FBpp0305758,FlyBase_Annotation_IDs:CG6955-PB; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688,FlyMine:FBpp0076699,modMine:FBpp0076699; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0305758; name=Lcp65Ad-PB; parent=FBgn0020641,FBtr0333581; dbxref=REFSEQ:NP_001261466,GB_protein:AGB94161,FlyBase:FBpp0305758,FlyBase_Annotation_IDs:CG6955-PB; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Cuticle protein LCP65Ad OS=Drosophila melanogaster GN=Lcp65Ad PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0076699 type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688,FlyMine:FBpp0076699,modMine:FBpp0076699; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0305758 type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0305758; name=Lcp65Ad-PB; parent=FBgn0020641,FBtr0333581; dbxref=REFSEQ:NP_001261466,GB_protein:AGB94161,FlyBase:FBpp0305758,FlyBase_Annotation_IDs:CG6955-PB; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0076699; name=Lcp65Ad-PA; parent=FBgn0020641,FBtr0076990; dbxref=FlyBase:FBpp0076699,FlyBase_Annotation_IDs:CG6955-PA,GB_protein:AAF50688.1,REFSEQ:NP_477278,GB_protein:AAF50688,UniProt/TrEMBL:P91939,FlyMine:FBpp0076699,modMine:FBpp0076699; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:join(6143469..6143599,6143691..6143886); ID=FBpp0305758; name=Lcp65Ad-PB; parent=FBgn0020641,FBtr0333581; dbxref=REFSEQ:NP_001261466,GB_protein:AGB94161,FlyBase:FBpp0305758,FlyBase_Annotation_IDs:CG6955-PB,UniProt/TrEMBL:P91939; MD5=b6e8fa61fafa66751ff3576243f6bc99; length=108; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 108 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of chitin-based larval cuticle [ISS]
    structural constituent of chitin-based cuticle [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFTIAIAFT CILACSLAAP PAIQQDAQVL RFDSDVLPEG YKFAVETSDG KSHQEEGQLK  60
   61 DVGTDHEAIV VRGSYAYVGD DGQTYSIQYL ADENGFQPEG AHLPRPVQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..108] Pfam 31.0 No description for PF00379.14 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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