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Protein Overview: FBpp0297230, mRp...

General Information:
Name(s) found: FBpp0297230 [FlyBase]
mRpS6-PA / FBpp0073144 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=3L:join(4364701..4364745,4364812..4365210); ID=FBpp0297230; name=mRpS6-PB; parent=FBgn0035534,FBtr0306093; dbxref=REFSEQ:NP_001246623,GB_protein:AFH04294,FlyBase:FBpp0297230,FlyBase_Annotation_IDs:CG15016-PB; MD5=3fe4bc171ea021b780480a4af73871c9; length=147; release=r5.56; species=Dmel; [FlyBase]
  • The gene mitochondrial ribosomal protein S6 is referred to in FlyBase by the symbol Dmel\mRpS6 (CG15016, FBgn0035534). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:4364555..4365243. It has the cytological map location 64B2. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 147 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial small ribosomal subunit [ISS][NAS]
    Biological Process: translation [ISS][NAS]
    Molecular Function: structural constituent of ribosome [ISS][NAS]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSYELALVL RQLPRPELIS VIRRTAESIL DKGGIIRKLE NLGSRALPHK VSEHGVVHRE  60
   61 GTHFTIAFDT APTKIADLKE EFGRDIDIIR RYIFKVEEPE QKPCTLHEEM LPPAYRKDVQ 120
  121 EIIAAAQKKQ KKKFNYNSGL DYYPFQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] PSI-BLAST 34.045757 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.72663177460478 bayes_pls_golite062009
  • structural molecule activity
    		•  9.15324307340032 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle