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Protein Overview: l(3)02640-PA

General Information:
Name(s) found: l(3)02640-PA / FBpp0072572 [FlyBase]
Description(s) found:
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  • gi|77403925|gb|ABA81841.1| GH16723p [Drosophila melanogaster] [NCBI NR]
  • gi|7292071|gb|AAF47484.1| lethal (3) 02640 [Drosophila melanogaster] [NCBI NR]
  • gi|211938543|gb|ACJ13168.1| FI03834p [Drosophila melanogaster] [NCBI NR]
  • gi|20130425|ref|NP_612103.1| lethal (3) 02640 [Drosophila melanogaster] [NCBI NR]
  • The gene lethal (3) 02640 is referred to in FlyBase by the symbol Dmel\l(3)02640 (CG9165, FBgn0010786). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:1334877..1339407. It has the cytological map location 61F6-61F7. Based on sequence similarity, it is predicted to have molecular function</span>: hydroxymethylbilane synthase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: tetrapyrrole biosynthetic process. 19 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG9165-PA translation from_gene[CG9165 l(3)02640 FBgn0010786] seq_release:3 mol_weight=68901 cds_boundaries:(3L:1,315,870..1,319,796[+]) aa_length:652 transcript_info:[CG9165-RA seq_release:3] gene_info:[gene symbol:l(3)02640 FBgn0010786 gene_boundari [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W0G4) CG9165 protein [DrosMelano7227.FASTAC.txt]
  • (AE003471) CG9165 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9165-PA [Drosophila melanogaster]gi|20130425|ref|NP_612103.1| CG9165-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_ [fly-100309-contam.fasta]
  • GH16723p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG9165-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • lethal (3) 02640 CG9165-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • FI03834p OS=Drosophila melanogaster GN=l(3)02640 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484,FlyMine:FBpp0072572,modMine:FBpp0072572; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484,FlyMine:FBpp0072572,modMine:FBpp0072572; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484,FlyMine:FBpp0072572,modMine:FBpp0072572; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FI03834p OS=Drosophila melanogaster GN=l(3)02640 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0072572 type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484,FlyMine:FBpp0072572,modMine:FBpp0072572; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(1335241..1335288,1335944..1336016,1337271..1337540,1337603..1339170); ID=FBpp0072572; name=l(3)02640-PA; parent=FBgn0010786,FBtr0072679; dbxref=FlyBase:FBpp0072572,FlyBase_Annotation_IDs:CG9165-PA,GB_protein:AAF47484.1,REFSEQ:NP_612103,GB_protein:AAF47484,UniProt/TrEMBL:Q9W0G4,FlyMine:FBpp0072572,modMine:FBpp0072572; MD5=ddbee486f39439c6bf4394df524fbd80; length=652; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 652 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tetrapyrrole biosynthetic process [IEA]
    Molecular Function: hydroxymethylbilane synthase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAQEKVIRV GSRKSELALI QTKHVIGRLQ KLYPKQKFEI HTMSTFGDRV LNVSLPKIGE  60
   61 KSLFTRDLED ALRNGGVDFV VHSLKDLPTA LPTGMAIGAV LEREDARDAL VLRENFKGHT 120
  121 IASLPKGSVI GTSSLRRTAQ IRRMYPHLTV CDIRGNLNTR LAKLDAADSK FSGIILAQAG 180
  181 LVRMGWMSRI SQVLEPTDLL YAVGQGALAV ECRANDDQVL AMLQKLMCLN TTCRILAERS 240
  241 FLKTLGGGCS APVAVWSNLK GEPLNGNSQE VGLSLTGAVW SLDGAIEIRN HLACALNEQK 300
  301 LEGDQRKRGA QEATSQLQEE TSSSCDSPPA TKRARNGNDS SGSDSNSSSP RQQGSPPVIC 360
  361 EDAAACAALS GYTVDQLSDL ASHCPVLSNN NAVGPTGVSG GGDADTNNVN TTPRQCPLRL 420
  421 VGGQEVMGQC PVPHNQAMVP AKCPVAHADS GDSFSAKSGS GGESATTAHC PLQMPVGQDF 480
  481 MGECPYVNND VKVSFAQAGK CPVTGGVAGA SASILPTPPS SRASNASSAG DEVDNVATSS 540
  541 KCPFAAMHQG SGLEAPAKDN GNAATAKCPF LQKTVQMFDY ADEEQPTPQH SVLIEDVENL 600
  601 FCGLYQHACH SRGIYEKANQ LGKTLAEDLI KRGALDVMKV AQAEIHGKVA SS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle