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Protein Overview: LysS-PA

General Information:
Name(s) found: LysS-PA / FBpp0072527 [FlyBase]
Description(s) found:
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  • gi|7292039|gb|AAF47453.1| lysozyme S [Drosophila melanogaster] [NCBI NR]
  • gi|21430462|gb|AAM50909.1| LP06719p [Drosophila melanogaster] [NCBI NR]
  • gi|17136660|ref|NP_476829.1| lysozyme S [Drosophila melanogaster] [NCBI NR]
  • gi|12644242|sp|P37160.2|LYSS_DROME RecName: Full=Lysozyme S; AltName: Full=1,4-beta-N-acetylmuramidase S; Flags: Precursor [NCBI NR]
  • Lysozyme S OS=Drosophila melanogaster GN=LysS PE=2 SV=2 [Swiss-Prot]
  • The gene Lysozyme S is referred to in FlyBase by the symbol Dmel\LysS (CG1165, FBgn0004430). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:1227768..1228239. It has the cytological map location 61F4. Based on sequence similarity, it is predicted to have molecular function</span>: lysozyme activity. It is reported to be involved in the biological process</span>: antimicrobial humoral response. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG1165-PA translation from_gene[CG1165 LysS FBgn0004430] seq_release:3 mol_weight=15652 cds_boundaries:(3L:1,208,401..1,208,820[+]) aa_length:140 transcript_info:[CG1165-RA seq_release:3] gene_info:[gene symbol:LysS FBgn0004430 gene_boundaries:(3L:1,2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (P37160) Lysozyme S precursor (EC 3.2.1.17) (1,4-beta-N-acetylmuramidase S) [DrosMelano7227.FASTAC.txt]
  • (AE003470) LysS gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG1165-PA [Drosophila melanogaster]gi|21430462|gb|AAM50909.1| LP06719p [Drosophila melanogaster]gi|17136660|ref|NP_476829.1| CG1165-PA [Drosophila melanogaster]gi|12644242|sp|P37160|LYSS_DROME Lysozyme S precursor (1,4-beta-N-acetylmuramidase S) [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453; MD5=5cd49406465314242e4e505f78d9fd [fly-100309-contam.fasta]
  • CG1165-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Lysozyme S precursor (1,4-beta-N-acetylmuramidase S) [nr-271106-contam.fasta]
  • Lysozyme S CG1165-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LP06719p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453,FlyMine:FBpp0072527,modMine:FBpp0072527; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453,FlyMine:FBpp0072527,modMine:FBpp0072527; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453,FlyMine:FBpp0072527,modMine:FBpp0072527; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0072527 type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453,FlyMine:FBpp0072527,modMine:FBpp0072527; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:1227772..1228194; ID=FBpp0072527; name=LysS-PA; parent=FBgn0004430,FBtr0072631; dbxref=FlyBase:FBpp0072527,FlyBase_Annotation_IDs:CG1165-PA,GB_protein:AAF47453.1,REFSEQ:NP_476829,GB_protein:AAF47453,UniProt/Swiss-Prot:P37160,FlyMine:FBpp0072527,modMine:FBpp0072527; MD5=5cd49406465314242e4e505f78d9fd1b; length=140; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cell wall macromolecule catabolic process [IEA]
    antimicrobial humoral response [NAS]
    Molecular Function: lysozyme activity [IEA][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAFFALVLL AIAAPALAGR TLDRCSLARE MADLGVPRDQ LDKWTCIAQH ESDYRTWVVG  60
   61 PANSDGSNDY GIFQINDLYW CQADGRFSYN ECGLSCNALL TDDITNSVRC AQKVLSQQGW 120
  121 SAWAVWHYCS GWLPSIDECF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 46.045757 No description for 2fbdA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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