YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0311657, CG1...

General Information:
Name(s) found: FBpp0311657 [FlyBase]
CG13887-PB / FBpp0072481 [FlyBase]
CG13887-PC / FBpp0072480 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7292004|gb|AAF47419.1| CG13887, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24654889|ref|NP_728548.1| CG13887, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|23092723|gb|AAN11453.1| CG13887, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|19923024|ref|NP_612062.1| CG13887, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|17862836|gb|AAL39895.1| LP10861p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0311657; name=CG13887-PE; parent=FBgn0035165,FBtr0345588; dbxref=FlyBase:FBpp0311657,FlyBase_Annotation_IDs:CG13887-PE; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG13887 (CG13887, FBgn0035165). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3L:837856..839747. It has the cytological map location 61D2. Its molecular function is unknown. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: intracellular protein transport. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG13887-PB translation from_gene[CG13887 CG13887 FBgn0035165] seq_release:3 mol_weight=26155 cds_boundaries:(3L:818,750..820,058[+]) aa_length:228 transcript_info:[CG13887-RB seq_release:3] gene_info:[gene symbol:CG13887 FBgn0035165 gene_boundaries:(3 [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG13887-PC translation from_gene[CG13887 CG13887 FBgn0035165] seq_release:3 mol_weight=26155 cds_boundaries:(3L:818,750..820,058[+]) aa_length:228 transcript_info:[CG13887-RC seq_release:3] gene_info:[gene symbol:CG13887 FBgn0035165 gene_boundaries:(3 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W0M4) CG13887 protein (LP10861p) [DrosMelano7227.FASTAC.txt]
  • (AE003469) CG13887 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG13887-PC, isoform C [Drosophila melanogaster]gi|7292004|gb|AAF47419.1| CG13887-PB, isoform B [Drosophila melanogaster]gi|17862836|gb|AAL39895.1| LP10861p [Drosophila melanogaster]gi|19923024|ref|NP_612062.1| CG13887-PB [Drosophila melanogaster]gi|24 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c3 [fly-100309-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419; MD5=e5562c3 [fly-100309-contam.fasta]
  • CG13887-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG13887-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LP10861p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG13887, isoform B OS=Drosophila melanogaster GN=CG13887 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419,FlyMine:FBpp0072481,modMine:FBpp0072481; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG13887, isoform B OS=Drosophila melanogaster GN=CG13887 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419,FlyMine:FBpp0072481,modMine:FBpp0072481; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0311657; name=CG13887-PE; parent=FBgn0035165,FBtr0345588; dbxref=FlyBase:FBpp0311657,FlyBase_Annotation_IDs:CG13887-PE,GB_protein:AHN57916,REFSEQ:NP_001286891; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419,FlyMine:FBpp0072481,modMine:FBpp0072481; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0311657; name=CG13887-PE; parent=FBgn0035165,FBtr0345588; dbxref=FlyBase:FBpp0311657,FlyBase_Annotation_IDs:CG13887-PE,GB_protein:AHN57916,REFSEQ:NP_001286891; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • LP10861p OS=Drosophila melanogaster GN=CG13887 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0072480 type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0072481 type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419,FlyMine:FBpp0072481,modMine:FBpp0072481; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0311657 type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0311657; name=CG13887-PE; parent=FBgn0035165,FBtr0345588; dbxref=FlyBase:FBpp0311657,FlyBase_Annotation_IDs:CG13887-PE,GB_protein:AHN57916,REFSEQ:NP_001286891; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072480; name=CG13887-PC; parent=FBgn0035165,FBtr0072583; dbxref=FlyBase:FBpp0072480,FlyBase_Annotation_IDs:CG13887-PC,GB_protein:AAN11453.1,REFSEQ:NP_728548,GB_protein:AAN11453,UniProt/TrEMBL:Q9W0M4; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0072481; name=CG13887-PB; parent=FBgn0035165,FBtr0072584; dbxref=FlyBase:FBpp0072481,FlyBase_Annotation_IDs:CG13887-PB,GB_protein:AAF47419.1,REFSEQ:NP_612062,GB_protein:AAF47419,UniProt/TrEMBL:Q9W0M4,FlyMine:FBpp0072481,modMine:FBpp0072481; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3L:join(838121..838624,839250..839432); ID=FBpp0311657; name=CG13887-PE; parent=FBgn0035165,FBtr0345588; dbxref=FlyBase:FBpp0311657,FlyBase_Annotation_IDs:CG13887-PE,GB_protein:AHN57916,REFSEQ:NP_001286891,UniProt/TrEMBL:Q9W0M4; MD5=e5562c367579eac1b4bdef33abe40813; length=228; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    endoplasmic reticulum [IEA]
    Biological Process: intracellular protein transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVWTLIAG FLYAEIALVL LLVLPVLTPY RWNRFFKSKF LSMLGQQAHI YFLLIMGILV  60
   61 IFLLEAIREM RKYSGLQQSN EVHLNVEMQH SMKLFRAQRN FYISGFAIFL ALVIRRLVNL 120
  121 ICTQANLMAQ SEASFKQAQS ATAAARSLLE NKNTEKAKEA GEDTTLIELN KLRERVQELT 180
  181 SDLNREKKDK EAVKSQAESI NREYDRLTEE YSKLQKKITI GGGGNKDD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] Pfam 42.431798 No description for PF05529.3 was found. No confident structure predictions are available.
    2 View Details [130..228] PSI-BLAST 6.69897 No description for 2i1jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle