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Protein Overview: CG3494-PB, CG3494-PA

General Information:
Name(s) found: CG3494-PB / FBpp0072203 [FlyBase]
CG3494-PA / FBpp0072202 [FlyBase]
Description(s) found:
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  • gi|24762640|ref|NP_726449.1| CG3494, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|24762638|ref|NP_611915.1| CG3494, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21626749|gb|AAM68315.1| CG3494, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|21626748|gb|AAF47208.2| CG3494, isoform A [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3494 (CG3494, FBgn0035008). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:20361822..20362704. It has the cytological map location 60D1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG3494-PB translation from_gene[CG3494 CG3494 FBgn0035008] seq_release:3 mol_weight=27290 cds_boundaries:(2R:19,518,027..19,518,746[+]) aa_length:240 transcript_info:[CG3494-RB seq_release:3] gene_info:[gene symbol:CG3494 FBgn0035008 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG3494-PA translation from_gene[CG3494 CG3494 FBgn0035008] seq_release:3 mol_weight=27290 cds_boundaries:(2R:19,518,027..19,518,746[+]) aa_length:240 transcript_info:[CG3494-RA seq_release:3] gene_info:[gene symbol:CG3494 FBgn0035008 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W169) CG3494 protein [DrosMelano7227.FASTAC.txt]
  • CG3494-PB, isoform B [Drosophila melanogaster]gi|21626748|gb|AAF47208.2| CG3494-PA, isoform A [Drosophila melanogaster]gi|24762640|ref|NP_726449.1| CG3494-PB [Drosophila melanogaster]gi|24762638|ref|NP_611915.1| CG3494-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208; MD5=66b5d95042f8e3844049c94ec6 [fly-100309-contam.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec6 [fly-100309-contam.fasta]
  • CG3494-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG3494-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG3494, isoform A OS=Drosophila melanogaster GN=CG3494 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208,FlyMine:FBpp0072202,modMine:FBpp0072202; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:20361982..20362704; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:24474459..24475181; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208,FlyMine:FBpp0072202,modMine:FBpp0072202; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:24474459..24475181; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:24474459..24475181; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208,FlyMine:FBpp0072202,modMine:FBpp0072202; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:24474459..24475181; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0072202 type=protein; loc=2R:24474459..24475181; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208,FlyMine:FBpp0072202,modMine:FBpp0072202; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0072203 type=protein; loc=2R:24474459..24475181; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:24474459..24475181; ID=FBpp0072202; name=CG3494-PA; parent=FBgn0035008,FBtr0072295; dbxref=FlyBase:FBpp0072202,FlyBase_Annotation_IDs:CG3494-PA,GB_protein:AAF47208.2,REFSEQ:NP_611915,GB_protein:AAF47208,UniProt/TrEMBL:Q0E8W8,FlyMine:FBpp0072202,modMine:FBpp0072202; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:24474459..24475181; ID=FBpp0072203; name=CG3494-PB; parent=FBgn0035008,FBtr0072296; dbxref=FlyBase:FBpp0072203,FlyBase_Annotation_IDs:CG3494-PB,GB_protein:AAM68315.1,REFSEQ:NP_726449,GB_protein:AAM68315,UniProt/TrEMBL:Q0E8W8; MD5=66b5d95042f8e3844049c94ec65d89dc; length=240; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: phagocytosis, engulfment [IMP]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYMVCDGLNS PRLQGGKEAE ADGSQWPFPD KYHMRNTRIL QVSKAQISEV PMEVFEAAQQ  60
   61 ELVNIVSLDG NRLLEMPKDL PLLSEHLTQL VLNKNQISFV PTNISQYSKL TNLSLSNNLL 120
  121 CDLPMELGGL RLLRNLDISH NRFRQLPRCI YELERLETLS AHDNQIRAID ASESGLGGMR 180
  181 ELKRLNLGNN DIQIVPPILG KMQNLVELEL WGNPFRQPRH QILSMGTPAL LSYLRTRIPI 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..240] PSI-BLAST 29.522879 No description for 2ft3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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