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Protein Overview: CG13550-PA

General Information:
Name(s) found: CG13550-PA / FBpp0071919 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG13550 (CG13550, FBgn0034853). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19254412..19258984. It has the cytological map location 59D9. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle organization. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1395 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mitotic spindle organization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLDEFSDFN IDQLLGPSAP LQDALVAPYK QVSLPRSNQD VYAKRSRLAE RIAQNDELIR  60
   61 QVKQLQAQNK QLADLQRTAQ EVTDLYQKEK QQRIELEKRT KQIGERCGQL EKELDVQVGN 120
  121 CENLQEQLQV RGLPVEAKDV LSILMQFSQR LGDDCGLLRR DQNIMKKLRE HCKTIDVSVP 180
  181 TPKSPNSRSK RKAHQPGVNQ STQTDEEPAD PKPALCSVAV QVEGLIETRN QATQHKNTTT 240
  241 TRGTTTASFI KHHDVGTCFP EPKPLPNIRQ ILDEMLSWRD DVVIEPMSPL SDLQQELQLE 300
  301 DVPTNASVAT CTTLCDIHRE IDFVTDLPTQ IKVSASRPPS RTMLDSVKEE ARSSRELAKE 360
  361 LFNFLPQNQS CLTNLPPQAF EELWQVFGQM VLALLQRRSN PSMATPPSVS QADFTRWLYE 420
  421 LYEGTENQTE QTSNGSTSKR DFATSTECMD TGTDPIIQSP NISHEGHVTP IRLPSKPKER 480
  481 KRKSKKRKAA ATPKPIAKRK CLEMETNNEL EVEREQTPET AIQFLSNLET FNMANCDNLE 540
  541 MELDEEELYL LQLTSNAKQN ENKGNVRVQD PDDLKSPAQT SKFPKSENHL PAVLKETASS 600
  601 LKGYDEKQCP FPDKTEELMH KKTFEIQENI GSLTELPPNI DISAYPVSMA EVRIVSSNKP 660
  661 SEMEVNASEG TDSHLDKSVS NLDTGSMSLF GSDSDVESEY SIEQMAPELS DSDDTFDNSE 720
  721 EDCRSADEPS NSKKIRNSSL FGSESESDES EERALEADDL TEAEAKVEEK ESEQKSSDVA 780
  781 PAASSGKLLV VEADLVTKTQ PLFVEKLDLE NTQHTSTCTN PKETDESEDE HGLVIDEQIF 840
  841 ISQPEEPPLT VPIAAKRRRT QSELKTLSPP GEVRLTRQRA KQLLDEQKSG PEKGLSLVEQ 900
  901 IRRQLKKAIN KSEPFKKDST HDSKKDSTHD LKPLEHEDEL KAMQLGTNFE PIKLSCSISE 960
  961 ESPASPPACE PMDELDPPPI EIPLEQAACT RKDDQHKSIV QHVLKMDTGL EKLVEANRKT1020
 1021 LGKSQPQLCA SIGKYLQENM QLESTCSDLA MDIYKVTKSE AVIVNAMITV ICKIGLDDGP1080
 1081 VERLLNALKY LNFSQRFLAE LEERLFRNTK ERPATELALN YVRLYLKATA LQATMSAGYE1140
 1141 NPARLLLAKI LYHFDQDMPP LVMEVLRQFP TALPHREQRE YDNSDALITV IKHLLMNRQY1200
 1201 DMQDPNGAER LLLSKLRFEY HFQPYEPSKQ QVLENLVGKL KAGREEELGY AFALFCRRSP1260
 1261 HLKVVESVVG EHLMPLATSY CDLAAQNELY DARLGLLLHC ISLVLKPLPL DTDISAFVGF1320
 1321 LKRLLVAVPR SGVQLAAVKA SLRLQRFGFK YTLDALKDYR PNYELDPLTR AMIRCFAKRR1380
 1381 RHFRHVAATG RRTEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..398] PSI-BLAST 14.39794 Heavy meromyosin subfragment
    2 View Details [399..491] deduced N/A No confident structure predictions are available.
    3 View Details [492..732] deduced N/A No confident structure predictions are available.
    4 View Details [733..835] deduced N/A No confident structure predictions are available.
    5 View Details [836..1158] PSI-BLAST 7.522879 Tropomyosin
    6 View Details [1159..1395] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle