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Protein Overview: CG9394-PA, FBpp0...

General Information:
Name(s) found: FBpp0311511 [FlyBase]
CG9394-PA / FBpp0071495 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=2R:17006114..17008153; ID=FBpp0311511; name=CG9394-PB; parent=FBgn0034588,FBtr0345356; dbxref=FlyBase:FBpp0311511,FlyBase_Annotation_IDs:CG9394-PB; MD5=3de8bd44898eafe55cfa19a0d7b94031; length=679; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG9394 (CG9394, FBgn0034588). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:17005899..17008214. It has the cytological map location 57C1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: carbohydrate binding; glycerophosphodiester phosphodiesterase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: glycerol metabolic process; lipid metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 679 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: glycerol metabolic process [IEA]
    lipid metabolic process [IEA]
    Molecular Function: carbohydrate binding [IEA]
    glycerophosphodiester phosphodiesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSWSKTFA AFTVAWLSAL CLLPVETFCD TSYYEKYYAA RRYVPLKRNA PLVFNFTLTL  60
   61 PDADQLASFE RPALVGNLPV LGAWQAGRAV LLNRTAILNV WSASVEIPQN SSVEYRYFAA 120
  121 AVGQSGAVQI RRWESHVQAR TFNTTKFSGN RSDEFGLIGN ERQLSRGWLQ DSGNILQLKL 180
  181 FREALSLEEQ PEVGQEKLRL RLQPVDPKTL APILSSARAN VEYVRMAYGD SKLRVQPEYG 240
  241 VPYATGDILM FHVNLEQLDR VAYLVEVYAE QPDEDLVRLL GYSHLLHTSF SGTEGDVSID 300
  301 LISPLWQRVV GQLRIEYLHI RPMEKDGFDL RTSFANYWRS NWTALEIGHR GLGKSLTVTT 360
  361 NAAPLIENTV ATMLASSELG ADLVEFDVQL TSDLVPIIHH DFSIRVCIDS KTPTSKDDLT 420
  421 EVLLKDISYE QLKDLKTYQI VGNKIVEYPA HNNVEPPEQR LFPTLQDFFE RVNLSTGFDI 480
  481 EIKWPQQRAD GLFESEQTLD KNLFADRILA VVRRHGCGRL NVIKSFDADL CSLLRFKQHM 540
  541 YPVLFLSSSK ENVFNDPRTS TVEQSVNFAQ AFDLGGVSPN AVFVKADPGL VQRAKAQVPI 600
  601 VLLWGSDLKD RESIDWFLQQ GPTGVIYDRL DLWLGANRTS AFEAEQDLPG YFQLQCDPAP 660
  661 KEREVNSTIE SILSNVNFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] PSI-BLAST 30.0 CYCLODEXTRIN GLUCANOTRANSFERASE (E.C.2.4.1.19) (CGTASE)
    2 View Details [167..347] deduced N/A No confident structure predictions are available.
    3 View Details [348..679] PSI-BLAST 49.30103 No description for 2oogA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.400484690033704 bayes_pls_golite062009
  • protein binding
    		•  0.135246686415482 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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