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Protein Overview: Obp56i-PA

General Information:
Name(s) found: Obp56i-PA / FBpp0085639 [FlyBase]
Description(s) found:
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  • gi|66772861|gb|AAY55741.1| IP02288p [Drosophila melanogaster] [NCBI NR]
  • gi|24655982|ref|NP_725929.1| Odorant-binding protein 56i [Drosophila melanogaster] [NCBI NR]
  • gi|21626927|gb|AAM68413.1| Odorant-binding protein 56i [Drosophila melanogaster] [NCBI NR]
  • gi|158704062|gb|ABW78159.1| odorant-binding protein 56i [Drosophila melanogaster] [NCBI NR]
  • gi|117935440|gb|ABK57061.1| IP02285p [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 56i is referred to in FlyBase by the symbol Dmel\Obp56i (CG30448, FBgn0043532). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15755621..15756101. It has the cytological map location 56E4. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG30448-PA translation from_gene[CG30448 Obp56i FBgn0043532] seq_release:3 mol_weight=15535 cds_boundaries:(2R:14,931,829..14,932,306[+]) aa_length:140 transcript_info:[CG30448-RA seq_release:3] gene_info:[gene symbol:Obp56i FBgn0043532 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MLJ9) CG30448-PA [DrosMelano7227.FASTAC.txt]
  • CG30448-PA [Drosophila melanogaster]gi|24655982|ref|NP_725929.1| CG30448-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(15755621..15755680,15755739..15756101); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413; MD5= [fly-100309-contam.fasta]
  • IP02288p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Odorant-binding protein 56i CG30448-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP02285p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG30448-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(15755621..15755680,15755739..15756101); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(15755621..15755680,15755739..15756101); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • IP02285p OS=Drosophila melanogaster GN=Obp56i PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(15755621..15755680,15755739..15756101); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413,FlyMine:FBpp0085639,modMine:FBpp0085639; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(19868116..19868175,19868234..19868596); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413,FlyMine:FBpp0085639,modMine:FBpp0085639; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(19868116..19868175,19868234..19868596); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413,FlyMine:FBpp0085639,modMine:FBpp0085639; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0085639 type=protein; loc=2R:join(19868116..19868175,19868234..19868596); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413,FlyMine:FBpp0085639,modMine:FBpp0085639; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(19868116..19868175,19868234..19868596); ID=FBpp0085639; name=Obp56i-PA; parent=FBgn0043532,FBtr0086337; dbxref=FlyBase:FBpp0085639,FlyBase_Annotation_IDs:CG30448-PA,GB_protein:AAM68413.1,REFSEQ:NP_725929,GB_protein:AAM68413,UniProt/TrEMBL:Q4V3N1,FlyMine:FBpp0085639,modMine:FBpp0085639; MD5=a6c1e1c71a4ca3440803de5ba50a8dad; length=140; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 140 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFFTCCALL LVVVTLPTCF VQAGPIKDQC MAAAGITAQD VANRHETDDP GHSVKCFFRC  60
   61 FLENIGIIAD NQIIPGAFDR VLGHIVTAEA VERMEATCNM IKSETSHDES CEFAWQISEC 120
  121 YEGVRLSDVK KGQRTRNHRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 19.69897 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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