YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0309436, RpL...

General Information:
Name(s) found: FBpp0309436 [FlyBase]
RpL11-PA / FBpp0085717 [FlyBase]
Description(s) found:
Found 28 descriptions.
SHOW ALL
  • type=protein; loc=2R:join(15329989..15329994,15330123..15330245,15330306..15330603,15330818..15330945); ID=FBpp0309436; name=RpL11-PB; parent=FBgn0013325,FBtr0340533; dbxref=FlyBase:FBpp0309436,FlyBase_Annotation_IDs:CG7726-PB; MD5=682ca7a32dc65d4c4fb73f03ce0cdc71; length=184; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein L11 is referred to in FlyBase by the symbol Dmel\RpL11 (CG7726, FBgn0013325). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:15329854..15331014. It has the cytological map location 56D7. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 8 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 184 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    cytosolic large ribosomal subunit [ISS][NAS]
    ribosome [NAS]
    Biological Process: mitotic spindle elongation [IMP]
    mitotic spindle organization [IMP]
    translation [ISS][NAS]
    Molecular Function: protein binding [IPI]
    structural constituent of ribosome [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVTKKIKR DPAKNPMRDL HIRKLCLNIC VGESGDRLTR AAKVLEQLTG QQPVFSKARY  60
   61 TVRSFGIRRN EKIAVHCTVR GAKAEEILER GLKVREYELR RENFSSTGNF GFGIQEHIDL 120
  121 GIKYDPSIGI YGLDFYVVLG RPGYNVNHRK RKSGTVGFQH RLTKEDAMKW FQQKYDGIIL 180
  181 NTKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] PSI-BLAST 60.09691 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle