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Protein Overview: FBpp0301119, FBp...

General Information:
Name(s) found: FBpp0301119 [FlyBase]
FBpp0301116 [FlyBase]
FBpp0301112 [FlyBase]
Description(s) found:
Found 41 descriptions.
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  • type=protein; loc=2R:complement(15287365..15288860,15295346..15295417,15295480..15295560,15295629..15295923,15295988..15296098,15297125..15297248,15297310..15298021,15298095..15298578,15298665..15298760); ID=FBpp0301119; name=hts-PN; parent=FBgn0263391,FBtr0309111; dbxref=FlyBase_Annotation_IDs:CG43443-PN,FlyBase:FBpp0301119,REFSEQ:NP_001163206,GB_protein:ACZ94478; MD5=545dcfe6ce852463e294969ad255ea77; length=1156; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:complement(15287365..15288860,15295346..15295417,15295480..15295560,15295629..15295923,15295988..15296098,15297125..15297248,15297310..15298021,15298095..15298578,15298665..15298760); ID=FBpp0301116; name=hts-PK; parent=FBgn0263391,FBtr0309108; dbxref=FlyBase_Annotation_IDs:CG43443-PK,FlyBase:FBpp0301116,REFSEQ:NP_001163205,GB_protein:ACZ94477; MD5=545dcfe6ce852463e294969ad255ea77; length=1156; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:complement(15287365..15288860,15295346..15295417,15295480..15295560,15295629..15295923,15295988..15296098,15297125..15297248,15297310..15298021,15298095..15298578,15298665..15298760); ID=FBpp0301112; name=hts-PA; parent=FBgn0263391,FBtr0309104; dbxref=FlyBase_Annotation_IDs:CG43443-PA,FlyBase:FBpp0301112,REFSEQ:NP_476877,GB_protein:AAF57565; MD5=545dcfe6ce852463e294969ad255ea77; length=1156; release=r5.56; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1156 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    germline ring canal [IDA][NAS][TAS]
    female germline ring canal inner rim [TAS]
    fusome [IDA][NAS][TAS]
    spectrosome [IDA][TAS]
    plasma membrane [IDA]
    Biological Process: ovarian fusome organization [IMP]
    cystoblast division [IMP]
    testicular fusome organization [IMP]
    centrosome organization [IMP]
    germarium-derived oocyte fate determination [TAS]
    female germ-line cyst formation [TAS]
    germ-line cyst formation [TAS]
    female germline ring canal formation, actin assembly [IMP][NAS][TAS]
    fusome organization [TAS]
    spectrosome organization [TAS]
    meiotic spindle organization [IMP]
    Molecular Function: actin binding [ISS]
    metal ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVEQPPQN GIDPTAGEDD DNSKARPADI EQDMREMERR KRVEAIMGSK LFREELERIV  60
   61 DSARDGGAGA SGILQQLSDI VGVPVSRVGS VFKSSNCMVP INDIRGVESM GYAKGEKILR 120
  121 CKLAATFRLL DLYGWTQGLG AQITARLKVD QEYFLVNPYG LLYHEITASA LNKVDMQGQI 180
  181 VEQGTTNFGG NKSHFVLHSV VHAARPDIRC AIYIGCSPVV AISSLKTGLL PLTKDACVLG 240
  241 EITTHAYTGL FDEEERNRLV RSLGPNSKVI LLTNHGALCC GETIEEAFFA ACHIVQACET 300
  301 QLKLLPVGLD NLVLIPEESR KAIYEQSRRP PEDLEKKFAA VAAAEDGAAT AEKDAAEAVP 360
  361 KVGSPPKWRV GGAEFEALMR MLDNAGYRTG YIYRHPLIKS DPPKPKNDVE LPPAVSSLGY 420
  421 LLEEEELFRQ GIWKKGDIRK GGDRSRWLNS PNVYQKVEVL ETGTPDPKKI TKWVAEGSPT 480
  481 HSTPVRIEDP LQFVPAGTNP REFKRVQQLI KDNRRADKIS AGPQSHILEG VTWDEASRLK 540
  541 DATVSQAGDH VVMMGAASKG IIQRGFQHNA TVYKAPYAKN PFDNVTDDEL NEYKRTVERK 600
  601 KKSVHGEYTD TDFSESEAVL QAGTKKYPQS EPETEHQVIE IQTQQAPVPR QAEVVLSDAL 660
  661 VSQLAQKYAF LYSPGQYMYA CMKMAPLMHK VYVIHKVEPV SKHNYPPVND GNMSIHHNES 720
  721 GAGFMAQESS VISSTPVRNA LASVSLPEER NHSILGLSST PYRTISHFGF NCPLITSPTI 780
  781 LLHPEHRSIW QRVAEQREKV VSFIDLTTLS LDNRKLLNVV TSTHPTQCQS QSQSFISEKH 840
  841 IQLEVTPPKR KQRVYSATIS SGLDDSLDEL DSLMSGLAIN MPRSREQDSG LYRSYTFLPS 900
  901 NHALPKDTDA NNRDQTDRER PEAEQEESFH CAGDSGIGDS TGRRPRLATT SNDSSIQEAE 960
  961 AYTQGKHVKL TLSSSPTPTA TQSPATIEIL INVSLRNAEC VQTVQTHEQE FRAKLERVID1020
 1021 EEIHYISQQL AFKQRQAELH EQQTTSRAPI ATPSFTTMHP PAPASSSSMV HRSNSAPELC1080
 1081 HTYSYVAVGD LSTKQDQASP QLPAEGEPLN DILSSLEKEL ERLLNSVVTA HMLHNKAIIH1140
 1141 ECRARFSQLA DGIVSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..106] MSA 1.108973 View MSA. No confident structure predictions are available.
    2 View Details [107..354] PSI-BLAST 54.0 L-ribulose-5-phosphate 4-epimerase
    3 View Details [355..580] MSA 1.308965 View MSA. No confident structure predictions are available.
    4 View Details [581..769] MSA 7.324997 View MSA. No confident structure predictions are available.
    5 View Details [770..904] deduced N/A No confident structure predictions are available.
    6 View Details [905..1061] deduced N/A No confident structure predictions are available.
    7 View Details [1062..1156] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.7475113972494 bayes_pls_golite062009
  • protein binding
    		•  0.424505568216234 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle