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Protein Overview: CG30116-PA

General Information:
Name(s) found: CG30116-PA / FBpp0085899 [FlyBase]
Description(s) found:
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  • gi|24655073|ref|NP_725799.1| CG30116, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21627024|gb|AAM68461.1| CG30116, isoform A [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30116 (CG30116, FBgn0028496). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:14344467..14385516. It has the cytological map location 55C10-55D1. It is reported to have molecular function</span>: apoptotic protease activator activity. The biological processes in which it is involved are not known. 4 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
  • >CG30116-PA translation from_gene[CG30116 BcDNA:GH04922 FBgn0028496] seq_release:3 mol_weight=216176 cds_boundaries:(2R:13,523,576..13,540,398[-]) aa_length:1922 transcript_info:[CG30116-RA seq_release:3] gene_info:[gene symbol:BcDNA:GH04922 synonyms:[ [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8MLH7) CG30116-PA [DrosMelano7227.FASTAC.txt]
  • CG30116-PA, isoform A [Drosophila melanogaster]gi|24655073|ref|NP_725799.1| CG30116-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(14347358..14348149,14348417..14348733,14348800..14349042,14349102..14350185,14350243..14350338,14352356..14352538,14354484..14354598,14354883..14355012,14355080..14355527,14357007..14357464,14357569..14358481,14362092..1436 [fly-100309-contam.fasta]
  • CG30116-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(14347358..14348149,14348417..14348733,14348800..14349042,14349102..14350185,14350243..14350338,14352356..14352538,14354484..14354598,14354883..14355012,14355080..14355527,14357007..14357464,14357569..14358481,14362092..14362257,14362794..14362938,14362999..14363174,14363617..14363924,14363989..14364183); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(14347358..14348149,14348417..14348733,14348800..14349042,14349102..14350185,14350243..14350338,14352356..14352538,14354484..14354598,14354883..14355012,14355080..14355527,14357007..14357464,14357569..14358481,14362092..14362257,14362794..14362938,14362999..14363174,14363617..14363924,14363989..14364183); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG30116, isoform A OS=Drosophila melanogaster GN=CG30116 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(14347358..14348149,14348417..14348733,14348800..14349042,14349102..14350185,14350243..14350338,14352356..14352538,14354484..14354598,14354883..14355012,14355080..14355527,14357007..14357464,14357569..14358481,14362092..14362257,14362794..14362938,14362999..14363174,14363617..14363924,14363989..14364183); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461,FlyMine:FBpp0085899,modMine:FBpp0085899; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(18476484..18476678,18476112..18476419,18475494..18475669,18475289..18475433,18474587..18474752,18470064..18470976,18469502..18469959,18467575..18468022,18467378..18467507,18466979..18467093,18464851..18465033,18462738..18462833,18461597..18462680,18461295..18461537,18460912..18461228,18459853..18460644)); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461,FlyMine:FBpp0085899,modMine:FBpp0085899; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(18476484..18476678,18476112..18476419,18475494..18475669,18475289..18475433,18474587..18474752,18470064..18470976,18469502..18469959,18467575..18468022,18467378..18467507,18466979..18467093,18464851..18465033,18462738..18462833,18461597..18462680,18461295..18461537,18460912..18461228,18459853..18460644)); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461,FlyMine:FBpp0085899,modMine:FBpp0085899; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0085899 type=protein; loc=2R:complement(join(18476484..18476678,18476112..18476419,18475494..18475669,18475289..18475433,18474587..18474752,18470064..18470976,18469502..18469959,18467575..18468022,18467378..18467507,18466979..18467093,18464851..18465033,18462738..18462833,18461597..18462680,18461295..18461537,18460912..18461228,18459853..18460644)); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461,FlyMine:FBpp0085899,modMine:FBpp0085899; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(18476484..18476678,18476112..18476419,18475494..18475669,18475289..18475433,18474587..18474752,18470064..18470976,18469502..18469959,18467575..18468022,18467378..18467507,18466979..18467093,18464851..18465033,18462738..18462833,18461597..18462680,18461295..18461537,18460912..18461228,18459853..18460644)); ID=FBpp0085899; name=CG30116-PA; parent=FBgn0028496,FBtr0086720; dbxref=FlyBase:FBpp0085899,FlyBase_Annotation_IDs:CG30116-PA,GB_protein:AAM68461.1,REFSEQ:NP_725799,GB_protein:AAM68461,UniProt/TrEMBL:A1ZB93,FlyMine:FBpp0085899,modMine:FBpp0085899; MD5=be29c916e446d37df6fad70f40cce0b9; length=1922; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1922 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: apoptotic protease activator activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPIDESVL NALRGVTSAH TRLPKPLLIK IYVASLKQEF NQERRMLLEL VGPELQSLYD  60
   61 DRQIELEFVD MHFGTGDLEV HQLERDPYLI HDYLHEIDTC HAHTKSVFFM VLVGDGIGRQ 120
  121 LLPTKIDEDI FSAVLADQQT SADHEAMLVK WYERDASQTQ RQLKQDYRLM NVDAWLAESQ 180
  181 RMQSFLEQAF QSLLQGSGAS GRSPDFMERV QLLRRTQIER EVSQAMALTS EKILAVFRER 240
  241 AAQCSKGDVE AAERLRKIKD ELTMNLSTDN HTTLVVPGSA ASEAIDPDNE DHESYLSKFK 300
  301 NKVTDKLRLL IEAHITNDPD VIKGRKKTVQ EIFHEHATHL RILREHTDSD ALVESRVPQQ 360
  361 LRQNLMANFR NGSRHAPYFL CGADGSGKSA ILCHLYGQVG SWFGSTRVHR VIRFAKATPR 420
  421 SAYNLELLRV ICQQISIIFN IPEGYLPKDA SFDPLYINTW FQNLLRRVED MGNDVLFLFI 480
  481 DDLHLLNPLD CDIVTALSWL PTSLPWNVQI ICSSTTPVEQ LKFTPMQRDR FKSIEYQFDL 540
  541 NMGDYATKLK IPPQCIPGDV SFALYVEQQF DQLERHYGRQ AVGDLASYIT CSEYGLSETE 600
  601 LLELLMPTDD PESLIETKNG HFSFATFKKI HREMDLLLLL HDKIMSGKVL IQWRHNYCAS 660
  661 VAKRRYMDVQ RTRSLHCELA NLFFPQDEDE STLENESNRS ESKSVISLKD RDREKDSLSA 720
  721 VSAVSAGRKS SSTHHNDDTS TFYNPIAADV SYSMRHVEES WHHLMRSDDT TRFKQIAVCN 780
  781 FDFLLAAVQT VSISYLRCLI EHVRCYILDR DIELIYYTIR KSSDVLTRDP MQLGSQLISW 840
  841 LRPISEHDDD DNSLLSMTVR SATAWCDGYA VPLLVPLTGW LPAPLPSQIR TMTVSGTGCI 900
  901 RAVWLAPSKQ HLILATSSGD VQQWHIMSNS LDHIFKGHTA AVTCLLVAPQ SDSELLLTGS 960
  961 EDATVLVWHV GLRERRAHIK NAHTAPITGV AAGANNTLII SSSEDASIAI TDLASGKLRH1020
 1021 RITHHRGPVS GIVVAGACDV LISGGLDRTI CVWDLDNFTL LNTMQMTSAV LRIDISWNSV1080
 1081 FLLALCEDNA LYVRTLATGK ELHTLKGHKS KIRSISIGKD SQRCVVGCDD TRALIYDMHA1140
 1141 GKLVRSLPPN PGPVTAVHAM DNDDFLVTVG GNKITFYSFR NEELYVNPYS RHPRRKRSLK1200
 1201 RHAQAQRSPS TTLPPITCFD LSRDSQQMAI ASGRHVHLMR INTPEYQCTL EGHTAGVSCL1260
 1261 KFAPNGEFLA TGSEDRLVHI WNLALGEICN SFKGHTAPVV KVVVLMDSLR VISTDRDSML1320
 1321 LVWMAHSGNL LQTIQGPYKS LSVTNNMRFA VSTNGDNTLK IWSLTQEDEK YSVSHSDEIT1380
 1381 CFEISADSVH IISGSRDMSL KVWQATGGKL SQVLVGHSDA VTCVAVSVTN KTQVLSGSKD1440
 1441 MNLILWDLLT GEEVHTLAGH LGPVIGVKVS ADGSTAVSGS DDKTLIVWET KRGLALTSLQ1500
 1501 MHVPFTHFDI SLEVSRVLVQ LVDSYNLPVI CLHNTPAQYV KLPTYSGPSK DVEDLRPQGP1560
 1561 KRQMKRLLKK EVSLDTYTWQ KKYGHLTSSV MMAQVDERLK RRFSVSASME EISKIAETKT1620
 1621 GASQANLGPE QAALAQSQHF DQLEALWNKR SPPRRRHNAG LSRQTSLVED RLESSDDDEY1680
 1681 QDERAGMLSA SYDNIHHLAR LPGLRSLHDA WKTNSLRVPS RSARTKFYVS TPPPQNSQNS1740
 1741 SSLRLDSHVP GQFTDGVVAP DLVRDLLSVP PTVESPQRIS LRQLLHWPSL KSRIWRRQRN1800
 1801 CQSLQPNIRL NPPERLRPTP IIVVENYDVR RVQQLRTDLI LHPQTSRASV GHIEVAGSEH1860
 1861 LLAKKANYWQ RRWHLLRHKA ASTTTTTTSR SESSHPHRDS MNSHSNNSTP DPTANCNDCV1920
 1921 AQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..154] MSA 1.066971 View MSA. No confident structure predictions are available.
    2 View Details [155..846] PSI-BLAST 84.69897 Structure of the apoptotic protease-activating factor 1 bound to ADP
    3 View Details [847..939] PSI-BLAST 80.69897 No description for 2h13A was found.
    4 View Details [940..1283] PSI-BLAST 44.522879 Cdc4 F-box and linker domains; Cdc4 propeller domain
    5 View Details [1284..1406] FFAS03 5.03 No description for 2gnqA was found.
    6 View Details [1407..1491] PSI-BLAST 81.39794 No description for 2gnqA was found.
    7 View Details [1492..1620] deduced N/A No confident structure predictions are available.
    8 View Details [1621..1734] MSA 1.044994 View MSA. No confident structure predictions are available.
    9 View Details [1735..1922] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle