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Protein Overview: CG5033-PA

General Information:
Name(s) found: CG5033-PA / FBpp0088519 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5033 (CG5033, FBgn0028744). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13677197..13679953. It has the cytological map location 54E9. Based on sequence similarity, it is predicted to have molecular function</span>: ribonucleoprotein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: ribosome biogenesis. 5 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 784 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [ISS]
    Biological Process: ribosome biogenesis [ISS]
    rRNA processing [IEA]
    Molecular Function: ribonucleoprotein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKLALKRR GKDSEPTNEV VASSEASENE EEEEDLLQAV KDPGEDSTDD EGIDQEYHSD  60
   61 SSEELQFESD EEGNYLGRKQ SSSAEEDEES SDEEDNEEEE STDGEEVEDE EKDSKSKQTD 120
  121 DKPSGSGAAS KKALTAELPK RDSSKPEYQD SDTSDEEDIR NTVGNIPMHW YDEYKHIGYD 180
  181 WDAKKIIKPP QGDQIDEFLR KIEDPDFWRT VKDPLTGQDV RLTDEDIALI KRIVSGRIPN 240
  241 KDHEEYEPWI EWFTSEVEKM PIKNVPDHKR SFLPSVSEKK RVSRMVHALK MGWMKTTEEV 300
  301 EREKQAKRGP KFYMLWETDT SREHMRRIHD PVSAPKRDLP GHAESYNPPP EYLFDAKETK 360
  361 EWLKLKDEPH KRKLHFMPQK FKSLREVPAY SRYLRERFLR CLDLYLCPRA KRVKLNIDAE 420
  421 YLIPKLPSPR DLQPFPTVES MVYRGHTDLV RSVSVEPKGE YLVSGSDDKT VKIWEIATGR 480
  481 CIRTIETDEV VRCVAWCPNP KLSIIAVATG NRLLLVNPKV GDKVLVKKTD DLLAEAPSQD 540
  541 VIESERIKTA VQWSNAEADE QEKGVRVVIT HFKPIRQVTW HGRGDYLATV MPEGANRSAL 600
  601 IHQLSKRRSQ IPFSKSKGLI QFVLFHPVKP CFFVATQHNI RIYDLVKQEL VKKLLTNSKW 660
  661 ISGMSIHPKG DNLLVSTYDK KMLWFDLDLS TKPYQTMRLH RNAVRSVAFH LRYPLFASGS 720
  721 DDQAVIVSHG MVYNDLLQNP LIVPLKKLQT HEKRDEFGVL DVNWHPVQPW VFSTGADSTI 780
  781 RLYT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] MSA 1.10299 View MSA. No confident structure predictions are available.
    2 View Details [165..319] PSI-BLAST 45.39794 Cdc4 F-box and linker domains; Cdc4 propeller domain
    3 View Details [320..784] PSI-BLAST 75.154902 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle