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Protein Overview: eIF3-S9-PB, eIF3...

General Information:
Name(s) found: eIF3-S9-PA / FBpp0086098 [FlyBase]
eIF3-S9-PB / FBpp0086097 [FlyBase]
Description(s) found:
Found 37 descriptions.
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  • The gene eIF3-S9 is referred to in FlyBase by the symbol Dmel\eIF3-S9 (CG4878, FBgn0034237). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13423718..13426647. It has the cytological map location 54C3. Based on sequence similarity, it is predicted to have molecular function</span>: mRNA binding; translation initiation factor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translational initiation. 7 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene eIF3-S9 is referred to in FlyBase by the symbol Dmel\eIF3-S9 (CG4878, FBgn0034237). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:13423718..13426647. It has the cytological map location 54C3. Based on sequence similarity, it is predicted to have molecular function</span>: mRNA binding; translation initiation factor activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translational initiation. 7 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 690 amino acids

    Gene Ontology:
    Cellular Component: cytosol [ISS]
    eukaryotic translation initiation factor 3 complex [ISS]
    Biological Process: translational initiation [IEA][ISS]
    Molecular Function: nucleotide binding [IEA]
    translation initiation factor activity [IEA][ISS]
    RNA binding [IEA]
    mRNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKKKSEEHS GTDANDSDYQ EEPNFDDPPG FVDNISDEDL LGDMLAQRPS EADGVESVVV  60
   61 VDNIPKVEPV RLEKLKLVIN KLFSNYGEIV NVVYPVDEEG KTKGYAFMEY KQARQAEEAV 120
  121 KKLNNHRLDK NHTFAVNLFT DFQKYENIPE KWEPPTVQTF KVQSDLYNFI NDPDTYDQYC 180
  181 VAAETAPNCV QVGFWQNVLP EPFELETRER FTDTFVKWSP LGTYVVTFHK PGVAIWGGSS 240
  241 FQKIQKFPHP GTQFVEFSPC ENYLVTYGPT PTGQKIIIWD IRTGAEKRSF VADGMSVLSM 300
  301 FRWSHDDKFV ARMGENSIHI YETPSFYLLD LKSIKIPGIR GFSWSPTDNV IAYWVEEQNQ 360
  361 IPARVTLMEI PKKREIRNKN LFHVADCKLH WQKSGDYLCV KVDRYSKLKK DKKDLDVKFL 420
  421 GMFYNFEIFH MREKEIPVDS VEIRELILAF AWEPVGNKFS IIHGETNSSN VSFYEVNKGV 480
  481 KPSLVKRLEK KSCTHLFWSP RGQFIVMANL TMGTFEFVDS TNDYIITASP DHFRASEVEW 540
  541 DPTGRYVVTG VSSWKVKEDT GFNMYTFQGR IIKRTILKNF VQFLWRPRPP TLLSEEKQKE 600
  601 IKKNLKKYYA AFEQKDRLRL TRASKELLEK RSQLRETFME YRNKRIAEWA EQKSRRIMLR 660
  661 GHVDTDNLET DEVDEEIVEF LVKEEVTLLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] PSI-BLAST 10.30103 No description for 2nlwA was found.
    2 View Details [110..520] PSI-BLAST 53.522879 No description for 2ovpB was found.
    3 View Details [521..603] PSI-BLAST 63.69897 No description for 2gnqA was found.
    4 View Details [604..690] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle