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Protein Overview: Cbp53E-PA, FBpp0...

General Information:
Name(s) found: FBpp0309078 [FlyBase]
Cbp53E-PA / FBpp0086204 [FlyBase]
Description(s) found:
Found 34 descriptions.
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  • type=protein; loc=2R:join(12871845..12871995,12872204..12872289,12872347..12872436,12873424..12873510,12873576..12873716,12874086..12874141,12874210..12874255,12881665..12881721,12881787..12881858,12881916..12882062); ID=FBpp0309078; name=Cbp53E-PB; parent=FBgn0004580,FBtr0340072; dbxref=FlyBase:FBpp0309078,FlyBase_Annotation_IDs:CG6702-PB; MD5=4d3fd0658158581b2a63cee8e99ab768; length=310; release=r5.56; species=Dmel; [FlyBase]
  • The gene Calbindin 53E is referred to in FlyBase by the symbol Dmel\Cbp53E (CG6702, FBgn0004580). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12861465..12883566. It has the cytological map location 53E4. Based on sequence similarity, it is predicted to have molecular function</span>: calcium ion binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: cellular calcium ion homeostasis. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cellular calcium ion homeostasis [ISS]
    Molecular Function: calcium ion binding [ISS][NAS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSAAAAAAK RVQIEKAHNF MRQYRDPESR ELKKLSANQF MDVWAHYDKD GNGYIEGTEL  60
   61 DGFLREFVSS ANATDISPEA VTDTMLEELK SCFMEAYDDN QDGKIDIREL AQLLPMEENF 120
  121 LLLFRFDNPL ESSVEFMKIW REYDTDNSGY IEADELKNFL RDLLKEAKKI NDVSEDKLIE 180
  181 YTDTMLQVFD ANKDGRLQLS EMAKLLPVKE NFLCRQVFKG ATKLTKEDIE KVFSLYDRDN 240
  241 SGTIENEELK GFLKDLLELV KKDDYDAQDL AAFEETIMRG VGTDKHGKIS RKELTMILLT 300
  301 LAKISPDDEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..310] PSI-BLAST 22.09691 X-RAY STRUCTURE AN EF-HAND PROTEIN FROM DANIO RERIO Dr.36843


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle