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Protein Overview: FBpp0308231, FBp...

General Information:
Name(s) found: FBpp0308232 [FlyBase]
FBpp0308231 [FlyBase]
Description(s) found:
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  • gi|28573464|ref|NP_611097.2| CG8446, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|28380811|gb|AAF58045.2| CG8446, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|211938695|gb|ACJ13244.1| LD05679p [Drosophila melanogaster] [NCBI NR]
  • gi|20151579|gb|AAM11149.1| LD22815p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0308232; name=CG44243-PB; parent=FBgn0265178,FBtr0339087; dbxref=FlyBase:FBpp0308232,FlyBase_Annotation_IDs:CG44243-PB; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0308231; name=CG44243-PA; parent=FBgn0265178,FBtr0339086; dbxref=FlyBase:FBpp0308231,FlyBase_Annotation_IDs:CG44243-PA; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0292865; name=CG8446-PF; parent=FBgn0034089,FBtr0303859; dbxref=FlyBase:FBpp0292865,FlyBase_Annotation_IDs:CG8446-PF,REFSEQ:NP_001188958,GB_protein:ADV37204; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.43; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG8446 (CG8446, FBgn0034089). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:12083891..12086886. It has the cytological map location 52F7-52F8. Based on sequence similarity, it is predicted to have molecular function</span>: lipoyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein modification process. 10 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG8446-PA translation from_gene[CG8446 CG8446 FBgn0034089] seq_release:3 mol_weight=44105 cds_boundaries:(2R:11,261,506..11,262,899[+]) aa_length:396 transcript_info:[CG8446-RA seq_release:3] gene_info:[gene symbol:CG8446 FLAGGED_PROBLEMATIC FBgn00340 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8SX78) LD22815p (CG8446-PA) [DrosMelano7227.FASTAC.txt]
  • CG8446-PA [Drosophila melanogaster]gi|20151579|gb|AAM11149.1| LD22815p [Drosophila melanogaster]gi|28573464|ref|NP_611097.2| CG8446-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0112964; name=CG8446-PB; parent=FBgn0034089,FBtr0114472; dbxref=FlyBase:FBpp0112964,FlyBase_Annotation_IDs:CG8446-PB,REFSEQ:NP_611097,GB_protein:AAF58045; MD5=0e46 [fly-100309-contam.fasta]
  • CG8446-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD22815p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0112964; name=CG8446-PB; parent=FBgn0034089,FBtr0114472; dbxref=FlyBase:FBpp0112964,FlyBase_Annotation_IDs:CG8446-PB,REFSEQ:NP_611097,GB_protein:AAF58045; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0112964; name=CG8446-PB; parent=FBgn0034089,FBtr0114472; dbxref=FlyBase:FBpp0112964,FlyBase_Annotation_IDs:CG8446-PB,REFSEQ:NP_611097,GB_protein:AAF58045; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG8446, isoform B OS=Drosophila melanogaster GN=CG8446-RB PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0112964; name=CG8446-PB; parent=FBgn0034089,FBtr0114472; dbxref=FlyBase:FBpp0112964,FlyBase_Annotation_IDs:CG8446-PB,REFSEQ:NP_611097,GB_protein:AAF58045,FlyMine:FBpp0112964,modMine:FBpp0112964; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(12085286..12085843,12085990..12086451,12086512..12086682); ID=FBpp0292865; name=CG8446-PF; parent=FBgn0034089,FBtr0303859; dbxref=FlyBase:FBpp0292865,FlyBase_Annotation_IDs:CG8446-PF,REFSEQ:NP_001188958,GB_protein:ADV37204; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308231; name=CG44243-PA; parent=FBgn0265178,FBtr0339086; dbxref=FlyBase:FBpp0308231,FlyBase_Annotation_IDs:CG44243-PA,GB_protein:ADV37204,REFSEQ:NP_001188958; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308232; name=CG44243-PB; parent=FBgn0265178,FBtr0339087; dbxref=FlyBase:FBpp0308232,FlyBase_Annotation_IDs:CG44243-PB,GB_protein:AAF58045,REFSEQ:NP_611097; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308231; name=CG44243-PA; parent=FBgn0265178,FBtr0339086; dbxref=FlyBase:FBpp0308231,FlyBase_Annotation_IDs:CG44243-PA,GB_protein:ADV37204,REFSEQ:NP_001188958; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308232; name=CG44243-PB; parent=FBgn0265178,FBtr0339087; dbxref=FlyBase:FBpp0308232,FlyBase_Annotation_IDs:CG44243-PB,GB_protein:AAF58045,REFSEQ:NP_611097; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG44243, isoform A OS=Drosophila melanogaster GN=CG8446-RB PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0308231 type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308231; name=CG44243-PA; parent=FBgn0265178,FBtr0339086; dbxref=FlyBase:FBpp0308231,FlyBase_Annotation_IDs:CG44243-PA,GB_protein:ADV37204,REFSEQ:NP_001188958; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308232 type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308232; name=CG44243-PB; parent=FBgn0265178,FBtr0339087; dbxref=FlyBase:FBpp0308232,FlyBase_Annotation_IDs:CG44243-PB,GB_protein:AAF58045,REFSEQ:NP_611097; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308231; name=CG44243-PA; parent=FBgn0265178,FBtr0339086; dbxref=FlyBase:FBpp0308231,FlyBase_Annotation_IDs:CG44243-PA,GB_protein:ADV37204,REFSEQ:NP_001188958,UniProt/TrEMBL:Q8SX78; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:join(16197781..16198338,16198485..16198946,16199007..16199177); ID=FBpp0308232; name=CG44243-PB; parent=FBgn0265178,FBtr0339087; dbxref=FlyBase:FBpp0308232,FlyBase_Annotation_IDs:CG44243-PB,GB_protein:AAF58045,REFSEQ:NP_611097,UniProt/TrEMBL:Q8SX78; MD5=0e463d15236ead1f1d7f43bf1ea75238; length=396; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: lipoyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMLLRRNSS QLRLLLSSAA QATRLASSGV EPPSAGQQEI KKQRRQPPPV VPDSEIKKSV  60
   61 FISQSSDVFT NLALEDWLYK NFDFSRHHVL LLWANDPCVV IGRHQNPFTE ANVSQLVERG 120
  121 ITLARRNSGG GAVYHDLGNL NCTFFSPRER YDRKYNLNIV TRALFREWAI KAEINERDDI 180
  181 VVMNKKISGT AAKLGHPNSY HHCTILASAN KLHLGESLVR EPANYISKAT ASVPSPIRNL 240
  241 VDVNRTVNVA QLRSAVGYEY LRTAATTLED GGSTQTMQQR GFQLVNPTEK WFPGIEELRS 300
  301 NYSSWDWVIG KTPKFTVQKE LEVKGDEQDM KLKLSVEVEA GLMKEIGIQL PQSDQLVPVV 360
  361 TPLQGKPYNE ENLNGILGAL KLVSASNVKQ AINGSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 68.09691 No description for 2e5aA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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