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Protein Overview: row-PB

General Information:
Name(s) found: row-PB / FBpp0086534 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene relative of woc is referred to in FlyBase by the symbol Dmel\row (CG8092, FBgn0033998). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:11094028..11101137. It has the cytological map location 51E5-51E7. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: regulation of transcription, DNA-dependent. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 602 amino acids

    Gene Ontology:
    Cellular Component: protein complex [IDA]
    intracellular [IEA]
    Biological Process: regulation of transcription, DNA-dependent [IMP]
    Molecular Function: DNA binding [IEA]
    zinc ion binding [IEA]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVTRSEIS LDMEFWVEEL SPAQLAYYEK ITNEHNAVKG ALKNAVSANE GKELFNGQVF  60
   61 QAYSFKGKVL QELKEATLPK KPPKPTDSPS TPAAQSGGTG RGRGRPPRQP SNIAYLESSD 120
  121 EGDDDMPLAK RLALSAGKKA VAVANASSSF TPKSSKKAAS AASGGSSSPV PKSSGKLFKE 180
  181 SKPDIESPPK NYRPAEVNSV GGLVVGSTDE SKDSKDGKDG KDNKMQGKTY PSLVVLAKPF 240
  241 LKIKDMAATR SKLDSKVKLV LMLTPNKFCE WLLQEGLLRA QQHCINHRNN ELKLGIYSDV 300
  301 TKFPYTGGYV WISECCPYRF VSVFNNSIFE GAQHPPTFLL KLIYHWACQT SIQNVVQWVK 360
  361 VDSVYIKGIY TWLRAICTLA VHQKCKKLGG PGKFVEVGVI SLGTTSQDGS QRQVKVEVLG 420
  421 VYDYAEKSIR LRAVEPITDG DRNYKKRFQA ILEPLSRWVH KDSTICIDLT VDKITLFSMG 480
  481 FKNIVQAAAT DNTAKHNNSA VMEYLRRIVP RMFQNTLSLL SRQMIQQFLD ELVWRESFGT 540
  541 YALQAFNNII IHIAEQTRVT TNETITQRLY QVATNPFKDW SILPANYKET PANAAPKRLK 600
  601 KR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..78] deduced N/A No confident structure predictions are available.
    2 View Details [79..287] MSA 4.208994 View MSA. No confident structure predictions are available.
    3 View Details [288..487] deduced N/A No confident structure predictions are available.
    4 View Details [488..602] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle