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Protein Overview: CG17388-PA

General Information:
Name(s) found: CG17388-PA / FBpp0086618 [FlyBase]
Description(s) found:
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  • gi|7303180|gb|AAF58244.1| CG17388 [Drosophila melanogaster] [NCBI NR]
  • gi|24653651|ref|NP_610965.1| CG17388 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17388 (CG17388, FBgn0033937). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10329744..10330536. It has the cytological map location 51A2. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG17388-PA translation from_gene[CG17388 CG17388 FBgn0033937] seq_release:3 mol_weight=15378 cds_boundaries:(2R:9,505,965..9,506,754[+]) aa_length:145 transcript_info:[CG17388-RA seq_release:3] gene_info:[gene symbol:CG17388 FLAGGED_PROBLEMATIC FBgn00 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V722) CG17388 protein [DrosMelano7227.FASTAC.txt]
  • (AE003814) CG17388 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17388-PA [Drosophila melanogaster]gi|24653651|ref|NP_610965.1| CG17388-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(10329744..10330098,10330393..10330448,10330510..10330536); ID=FBpp0086618; name=CG17388-PA; parent=FBgn0033937,FBtr0087489; dbxref=GB_protein:AAF58244.1,FlyBase:FBpp0086618,FlyBase_Annotation_IDs:CG17388-PA,REFSEQ:NP_610965,GB_pr [fly-100309-contam.fasta]
  • CG17388-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(10329744..10330098,10330393..10330448,10330510..10330536); ID=FBpp0086618; name=CG17388-PA; parent=FBgn0033937,FBtr0087489; dbxref=GB_protein:AAF58244.1,FlyBase:FBpp0086618,FlyBase_Annotation_IDs:CG17388-PA,REFSEQ:NP_610965,GB_protein:AAF58244; MD5=e052497fbfe4ed580cda0d38e93bd86f; length=145; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(10329744..10330098,10330393..10330448,10330510..10330536); ID=FBpp0086618; name=CG17388-PA; parent=FBgn0033937,FBtr0087489; dbxref=GB_protein:AAF58244.1,FlyBase:FBpp0086618,FlyBase_Annotation_IDs:CG17388-PA,REFSEQ:NP_610965,GB_protein:AAF58244; MD5=e052497fbfe4ed580cda0d38e93bd86f; length=145; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG17388 OS=Drosophila melanogaster GN=Oaz PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 145 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: spiracle morphogenesis, open tracheal system [IMP]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYAFFAVGEK EDEENTGLLE PKEELLSGDE DNEDNEGEDE DEEVADEVAP EGGGGERPQL  60
   61 VPNESQQQSW PTADEPAAPA AVAKEEEAEE GSEELQHPRD EVVASDAAAN ANGHCKSSGP 120
  121 HPHLLAPPGH WALASGHCGM LLEIG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle