YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Rcd1-PC

General Information:
Name(s) found: Rcd1-PC / FBpp0086710 [FlyBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • The gene Reduction in Cnn dots 1 is referred to in FlyBase by the symbol Dmel\Rcd1 (CG8233, FBgn0033897). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:10035763..10040624. It has the cytological map location 50E1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: centriole replication. 3 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 934 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: centriole replication [IMP]
    Molecular Function: hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHSYMRDTP VRSDVHNGLT PARNILVRHP PQCPSCHTYP PQHEELSEIQ QAHVPPYDEV  60
   61 VAKEAMNECA RIAKYVKNNN SDEQDWVARV NKFNWTPMQE MVFEKVCSIL DQDQLARLAN 120
  121 DKRQHEPIHR RISSDKSASR FRKLLASVAW ESRITQWIHA LLMEHLSPSY MASYLEILQT 180
  181 LKTKLPTLVD KMLFGRPLNN SQELLAPVMK KRWEPNIMPK SRQLTHNAIM VVLPNMPTTG 240
  241 TVSDRMQKWY QALSTITQVV QISLPNTNNR IGNQNLDHVA ETIVSITRVK INELRTENPS 300
  301 RGIILVGFNA GAALALQVAL SESVACVVCM GFAYNTIRGP RGTPDDRMLD IKAPILFVIG 360
  361 QNSARTSQEE MEGLRERMQS ESSLVVVGSA DDALRVPKSK RRIEGVTQSM VDYMVVEEIF 420
  421 EFVNRTLSNP PGPRMPTCLM HQQGYQRLPK QSPHILADGN ANKAVQQMRK RKMDGGLDDS 480
  481 MGQPSKTKFV PHNDAQDYGD AQTTAGGSAS LPKVITPGVL GKQLPPVNLA AGTKIKMIPS 540
  541 SQFVQIKSLP SQSKLINYTL NKPSVGTSST ANIGSVVKTL PCSSVSGQQI ITLKTPSGQT 600
  601 QQFATAATST GAAGSSTSTG TGQKKYTVFK NANGMTMLHL TKSVPTTGSS SGSANMDLSN 660
  661 IIDMPIVFAD NEGNIPEHQQ ADKDIKPAPI RSANKSPLII SQKIIKEANK PSGMVTSGSI 720
  721 TAVSKPGNIV LNKGLQQLLN SSPGGTLATQ NKVVYLNRST IKPMGNVAPG THRVPIRIVS 780
  781 TPNTGGAVTT TASSSPIMVD PATGSKVAKT VNVQTIKPTG SVLAQGTIRQ AGNVGTKSYL 840
  841 QMINTAPGAS KTVAGDGKGS VRNIYFKSAT GLKQLPVQML GNRIPGGAVI SSTASASSGS 900
  901 PGLRRVVNIG PVSKVTATST TSSSIAATLT HNKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] MSA 1.024924 View MSA. No confident structure predictions are available.
    2 View Details [199..427] FFAS03 2.18 No description for 2fukA was found.
    3 View Details [428..540] deduced N/A No confident structure predictions are available.
    4 View Details [541..702] deduced N/A No confident structure predictions are available.
    5 View Details [703..934] MSA 5.238995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.12620676202498 bayes_pls_golite062009
  • hydrolase activity
    		•  0.756054874596198 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle