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Protein Overview: CG30060-PA

General Information:
Name(s) found: CG30060-PA / FBpp0086831 [FlyBase]
Description(s) found:
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  • gi|85857798|gb|ABC86433.1| IP07080p [Drosophila melanogaster] [NCBI NR]
  • gi|24653374|ref|NP_725293.1| CG30060 [Drosophila melanogaster] [NCBI NR]
  • gi|21627228|gb|AAM68576.1| CG30060 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30060 (CG30060, FBgn0050060). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:9310500..9311108. It has the cytological map location 50A7. Based on sequence similarity, it is predicted to have molecular function</span>: phosphatidylethanolamine binding. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG30060-PA translation from_gene[CG30060 CG30060 FBgn0050060] seq_release:3 mol_weight=23361 cds_boundaries:(2R:8,487,712..8,488,317[-]) aa_length:202 transcript_info:[CG30060-RA seq_release:3] gene_info:[gene symbol:CG30060 FBgn0050060 gene_boundarie [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8ML68) CG30060-PA [DrosMelano7227.FASTAC.txt]
  • CG30060-PA [Drosophila melanogaster]gi|24653374|ref|NP_725293.1| CG30060-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(9310500..9311108); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0050060,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576; MD5=37580e7f4f180d [fly-100309-contam.fasta]
  • CG30060-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP07080p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(9310500..9311108); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0050060,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(9310500..9311108); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0050060,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG30060 OS=Drosophila melanogaster GN=CG30060 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(9310500..9311108); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0050060,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576,FlyMine:FBpp0086831,modMine:FBpp0086831; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(13422995..13423603); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0265272,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576,FlyMine:FBpp0086831,modMine:FBpp0086831; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(13422995..13423603); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0265272,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576,FlyMine:FBpp0086831,modMine:FBpp0086831; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0086831 type=protein; loc=2R:complement(13422995..13423603); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0265272,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576,FlyMine:FBpp0086831,modMine:FBpp0086831; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(13422995..13423603); ID=FBpp0086831; name=CG30060-PA; parent=FBgn0265272,FBtr0087714; dbxref=FlyBase:FBpp0086831,FlyBase_Annotation_IDs:CG30060-PA,GB_protein:AAM68576.1,REFSEQ:NP_725293,GB_protein:AAM68576,UniProt/TrEMBL:Q29QL9,FlyMine:FBpp0086831,modMine:FBpp0086831; MD5=37580e7f4f180d87cad9139838cd9dfa; length=202; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 202 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: phosphatidylethanolamine binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSCPILCP VEKLVTELKR HHVIPRLFAC KPTKVISVLY PCDIDIKPGI MVVINETLKQ  60
   61 PIIRFKADPE HYHTLMMVDL DVPPDNNTEW LIWMVGNIPG CDVAMGQTLV AYDNRRTIHG 120
  121 SNIHRIVFLA FKQYLELDFD ETFVPEGEEK GRGTFNCHNF ARKYALGNPM AANFYLVEWL 180
  181 WRWTPTYLVS EHEFEPSNGN EN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..202] PSI-BLAST 53.69897 Phosphatidylethanolamine binding protein, PEBP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

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