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Protein Overview: FBpp0308787, CG1...

General Information:
Name(s) found: FBpp0308787 [FlyBase]
CG17019-PA / FBpp0086919 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=2R:complement(8818872..8819047,8819107..8819246,8819307..8820867,8820946..8821103,8821176..8821243); ID=FBpp0308787; name=CG17019-PB; parent=FBgn0033783,FBtr0339738; dbxref=FlyBase:FBpp0308787,FlyBase_Annotation_IDs:CG17019-PB; MD5=98f7d142791c2f17a02e5454791897e9; length=700; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG17019 (CG17019, FBgn0033783). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8818417..8821550. It has the cytological map location 49E1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: protein binding; zinc ion binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: negative regulation of apoptosis. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 700 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of apoptosis [ISS]
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPCESCGVEF TVFRRKRACF DCKRYYCANC IASRRCKRCS VFAQRPLSRT DLLKLKPKDL  60
   61 IFYLQSKHIS TEGCLEKEEL VGLVLTHVAQ VDRSRGSNAS SNSPGRGQAN PIDSLKQSCQ 120
  121 NFFSNLSDNI SDSLASFDSK VTTKPPESRQ PEVPTHIFEQ PRVSTREIPT YASAVNGGPQ 180
  181 HVHVQQQATT TNGGSQSSSS PSTSTQSSNN RDASSSSQAH VAHQEARNEE QEDAQSKSDC 240
  241 ECSDEEIMAT FSERVSISLK TDTSGRRVNA AAEPSPVDLA NVDNGPAGNT APSPGCSKPG 300
  301 SSSSKADASS QSSFEELGAI GGISDESKAN TDTNSSHLDQ WQVLEVNRIE AVEETPTTSA 360
  361 ADEILEVTLR SRPAVEGDDS EMGESTQALN VNQRPANPSP AFYPAVPQRT KKVTRRRSDG 420
  421 YLNRRYHSSD DESPVAPGGP GLSLGLSTLS EHPEHGLHPH SHRQSCQRCG KNKTNIRRHV 480
  481 EKMRRHLENS QMSEEDIKRE LQEFLTYLEQ RTKSVDASDA DSHAVSPLSV DAISVAAGGR 540
  541 SPDMPITPTI EFSPTQDEDI RWDDDEGIHV YAAPSDFEPT AGIDSRFVNL EDFEDLKDLE 600
  601 GLTVKQLKEV LMLHRVDYKG CCEKQELLDR VSRLWKTMRE CPAVEKLATD ELCKICMDAP 660
  661 IECVFLECGH MATCTSCGKV LNECPICRQY IVRVVRFFRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] PSI-BLAST 20.154902 Crystal Structure of a FYVE-type domain from caspase regulator CARP2
    2 View Details [150..328] deduced N/A No confident structure predictions are available.
    3 View Details [329..462] MSA 4.174981 View MSA. No confident structure predictions are available.
    4 View Details [463..622] deduced N/A No confident structure predictions are available.
    5 View Details [623..700] PSI-BLAST 13.522879 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.59453362121051 bayes_pls_golite062009
  • protein binding
    		•  0.705012166135047 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle