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Protein Overview: spt4-PA

General Information:
Name(s) found: spt4-PA / FBpp0086953 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • The gene spt4 is referred to in FlyBase by the symbol Dmel\spt4 (CG12372, FBgn0028683). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8521122..8523546. It has the cytological map location 49B10. Based on sequence similarity, it is predicted to have molecular function</span>: chromatin binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: non-covalent chromatin modification. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 116 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: non-covalent chromatin modification [ISS]
    positive regulation of transcription [IEA]
    Molecular Function: zinc ion binding [IEA]
    positive transcription elongation factor activity [IEA]
    chromatin binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFDAIPKDL RGLRACLVCS LVKSFDQFET DGCENCEEFL RMKNNKDNVY DHTSNNFDGI  60
   61 IALTTPTDSW VAKWQRLSRF TRGIYAISVS GTLPQSTLRD MKNRGIVYKS RDRSQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 40.522879 No description for 2exuA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle