YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0311866, Tap...

General Information:
Name(s) found: FBpp0311866 [FlyBase]
Tapdelta-PA / FBpp0087250 [FlyBase]
Description(s) found:
Found 29 descriptions.
SHOW ALL
  • type=protein; loc=2R:complement(7257958..7258218,7258278..7258517); ID=FBpp0311866; name=Tapdelta-PB; parent=FBgn0021795,FBtr0345952; dbxref=FlyBase:FBpp0311866,FlyBase_Annotation_IDs:CG9035-PB; MD5=bf33d2cfa08fef1fcf9e77cde5d9455d; length=166; release=r5.56; species=Dmel; [FlyBase]
  • The gene Translocon-associated protein Ã?&#142;Ã?´ is referred to in FlyBase by the symbol Dmel\TapÃ?&#142;Ã?´ (CG9035, FBgn0021795). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:7257791..7258675. It has the cytological map location 47F7. Based on sequence similarity, it is predicted to have molecular function</span>: signal sequence binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: protein retention in ER lumen. 7 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 166 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    integral to membrane [IEA]
    Sec61 translocon complex [ISS]
    signal recognition particle, endoplasmic reticulum targeting [ISS]
    Biological Process: protein retention in ER lumen [ISS]
    Molecular Function: signal sequence binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQLFAICL IAAVCASGVY GSCKATVSSF STQDATILTQ LAHVGEFTLQ CSGAAPASLF  60
   61 AEFPCGKVVP VAKVGDNKYQ VSWVEDIKQG SSGNVQVRLF DEDGYANVRK AQRDGDKVSS 120
  121 VKSLLDISVP TKGAYKGPWI KAELLAAFLV GGFAYFAFTT KGKVQS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] Pfam 26.167491 No description for PF05404.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle