YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Obp47a-PA

General Information:
Name(s) found: Obp47a-PA / FBpp0087295 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|24652587|ref|NP_610632.1| Odorant-binding protein 47a, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21627499|gb|AAF58726.2| Odorant-binding protein 47a, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene Odorant-binding protein 47a is referred to in FlyBase by the symbol Dmel\Obp47a (CG12944, FBgn0033573). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:6797428..6797990. It has the cytological map location 47C6. Based on sequence similarity, it is predicted to have molecular function</span>: odorant binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: sensory perception of chemical stimulus. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG12944-PA translation from_gene[CG12944 Obp47a FBgn0033573] seq_release:3 mol_weight=18882 cds_boundaries:(2R:5,974,652..5,975,211[+]) aa_length:165 transcript_info:[CG12944-RA seq_release:3] gene_info:[gene symbol:Obp47a FBgn0033573 gene_boundaries: [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9V5S2) CG12944 protein [DrosMelano7227.FASTAC.txt]
  • CG12944-PA, isoform A [Drosophila melanogaster]gi|24652587|ref|NP_610632.1| CG12944-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:join(6797428..6797481,6797547..6797990); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726; MD5=3f6b [fly-100309-contam.fasta]
  • Odorant-binding protein 47a CG12944-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG12944-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:join(6797428..6797481,6797547..6797990); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:join(6797428..6797481,6797547..6797990); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Odorant-binding protein 47a, isoform A OS=Drosophila melanogaster GN=Obp47a PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:join(6797428..6797481,6797547..6797990); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726,FlyMine:FBpp0087295,modMine:FBpp0087295; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:join(10909923..10909976,10910042..10910485); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726,FlyMine:FBpp0087295,modMine:FBpp0087295; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:join(10909923..10909976,10910042..10910485); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726,FlyMine:FBpp0087295,modMine:FBpp0087295; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Odorant-binding protein 47a, isoform A OS=Drosophila melanogaster GN=Obp47a PE=4 SV=1 [DROME.fasta.20160308]
  • FBpp0087295 type=protein; loc=2R:join(10909923..10909976,10910042..10910485); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726,FlyMine:FBpp0087295,modMine:FBpp0087295; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:join(10909923..10909976,10910042..10910485); ID=FBpp0087295; name=Obp47a-PA; parent=FBgn0033573,FBtr0088199; dbxref=FlyBase:FBpp0087295,FlyBase_Annotation_IDs:CG12944-PA,GB_protein:AAF58726.2,REFSEQ:NP_610632,GB_protein:AAF58726,UniProt/TrEMBL:A1Z8E3,FlyMine:FBpp0087295,modMine:FBpp0087295; MD5=3f6b03d90cebcbca7d75e4165f52cf08; length=165; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 165 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: sensory perception of chemical stimulus [UNKNOWN][ISS]
    transport [IEA]
    Molecular Function: odorant binding [UNKNOWN][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRVLVLLLV LKMFALSESR FAKININLGL TVADESPKTI TEEMIRLCGD QTDISLRELN  60
   61 KLQREDFSDP SESVQCFTHC LYEQMGLMHD GVFVERDLFG LLSDVSNTDY WPERQCHAIR 120
  121 GNNKCETAYR IHQCQQQLKQ QQQNLLATKE VEVTTTPAGS DETKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..165] PSI-BLAST 26.0 AgamOBP1, and odorant binding protein from Anopheles gambiae complexed with PEG


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle